Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1978 95.1 2e-15 seq9 95.1 2e-15 seq1861 93.3 7e-15 seq1694 80.6 4e-11 >seq1978 Length=34629 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || || ||||| ||||| || |||||||| ||||||||||| ||||||||| | || Sbjct 11522 AGGTATTACAAAGCCTGCTATTCGGCGTCTGGCGCGTCGTGGTGGTGTCAAGCGTATTTC 11581 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || ||| |||||||||||| | | |||| | |||||||| Sbjct 11582 GGGTTTGATCTATGAAGAGACCAGGGGTGTTCTCAAGATCTT 11623 >seq9 Length=6376 Score = 95.1 bits (104), Expect = 2e-15 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| |||||||||||||| || |||||||| || ||||||||| |||| Sbjct 5749 AGGTATCACAAAGCCCGCTATCCGTCGTCTTGCCCGTCGTGGCGGTGTCAAGCGTATCTC 5690 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 || | |||| || |||| |||| ||| | ||||||||||| Sbjct 5689 CGGTCTTATCTACGAGGAGACCCGTGGTGTGCTCAAGATCTTCCT 5645 >seq1861 Length=15333 Score = 93.3 bits (102), Expect = 7e-15 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||||||||| || ||||||||||| ||||||||| ||||||| || ||||||| Sbjct 9052 GCTATCCGTCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTGGTCTGATCTATGAG 9111 Query 16547 GAGATTCGTGATGTTTTGAAGATCTT 16572 || | |||| |||| | |||||||| Sbjct 9112 GAAACCCGTGGTGTTCTCAAGATCTT 9137 >seq1694 Length=216798 Score = 80.6 bits (88), Expect = 4e-11 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 ||||| |||||||| || |||||||| || || |||||| |||| || | |||| || Sbjct 152916 GCTATTCGTCGTCTCGCCCGTCGTGGCGGTGTGAAGCGTATCTCGGGCCTCATCTACGAG 152975 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGA 16593 |||| ||||| ||| ||||||||||| | ||| || |||| ||| Sbjct 152976 GAGACTCGTGGTGTCCTGAAGATCTTCTTGGAGAATGTCATCCGTGA 153022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072439707167