Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1814 131 2e-25 seq1824 116 5e-21 >seq1814 Length=443622 Score = 131 bits (144), Expect = 2e-25 Identities = 373/565 (66%), Gaps = 14/565 (2%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 || ||| || || ||| ||||| || || || | ||| || || |||||||| || || Sbjct 433700 CATACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGT 433759 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 | || ||||| || || ||||| || ||||||||||| || || || | ||||| || Sbjct 433760 TAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCAGAGAA 433819 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCG--GCGCT---G 33474 ||| || ||||| ||||| || || || | | | ||| | ||| || | || | Sbjct 433820 GAATATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGC--TAAACGATGACCTCTCG 433877 Query 33475 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33534 || |||||| | ||||| || || |||||||| | || ||||| || || Sbjct 433878 TCCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATA 433937 Query 33535 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 33594 ||| |||| | || | | | | ||||| | || || || |||| | || | Sbjct 433938 GCAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTGATGTAGGTGTCAATCAGTA-ACGA 433996 Query 33595 -TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653 ||| |||| || || ||||| || || | || || ||||| ||||||| ||| || Sbjct 433997 GTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTC 434056 Query 33654 GGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACT 33713 || | ||| || || | | || ||||| | | |||||||| || || ||||| Sbjct 434057 GGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGTCTGA 434116 Query 33714 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT-- 33770 ||| || ||||| || | ||| ||| || || | |||| | | || ||||||| Sbjct 434117 GGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGT-TTAGTTTGT 434175 Query 33771 -ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 33829 | |||||| || || | || || | ||| ||| | ||||| || || |||| Sbjct 434176 CGTGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCT 434235 Query 33830 CTGCCTTTTTATACATGTTCCAGAT 33854 | |||||||| ||||| | |||||| Sbjct 434236 CGGCCTTTTTGTACATTTGCCAGAT 434260 >seq1824 Length=21986 Score = 116 bits (128), Expect = 5e-21 Identities = 288/436 (66%), Gaps = 7/436 (2%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||||||| ||||| ||| ||||| | ||| || | |||||||| | ||||| Sbjct 14545 CAGGCGAAATCGGTGTGCAAACCTTCGTCACGACTGATGAACTCGTTGGAGAGCGTGAAC 14486 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || || | || || ||||| || | |||||| ||||||||||| || | || ||||| Sbjct 14485 CCAGGTAATAACCCTCGCTTCTTGATCCAAAAGATGGAAGCGAAGGAGCTGGAGAAGAAT 14426 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 33480 || ||||| || |||| ||| |||| ||| | || | || | ||| | | | Sbjct 14425 ATACCTTCCACCGCAGAAAACGCAACAAGACGTTCGGGAAAA--GTTGCTTGCTTATTCG 14368 Query 33481 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33538 ||||| | ||||| | |||||||| | ||||| || || | | ||||| | Sbjct 14367 CAATCCAGCGGAGGGCCCATTGTGCCTTCTTCTGCACACACGGAATGGAGTGAATGGCGT 14308 Query 33539 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33598 |||| | || ||| || | || |||| || | | ||| |||| Sbjct 14307 TAAACAAATGCGACCTTTGCCCGGAGTCCTCTACGAAAGTCTCAAGTAGAAGGGCGTACA 14248 Query 33599 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33658 | |||||||| | ||| ||||| ||||| || || || ||||| || ||||||| | Sbjct 14247 TCTCCGAATGGACGTTCTCAATCATAATCTGGAACCCATAAAAACACCTGGCCTCGGGCA 14188 Query 33659 TCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTG 33718 ||| ||||| || ||||| ||| || || ||||| || || || || || | Sbjct 14187 CCTGAACTTCGCTAGCGAATCGCTCCAACAGGTTCTCATTTACAATCCCATCGGATGCAG 14128 Query 33719 CAAAAAACGCCAATAC 33734 | || |||||||| || Sbjct 14127 CGAAGAACGCCAAAAC 14112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622923691530040