Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1814 114 3e-20 seq616 105 2e-17 >seq1814 Length=443622 Score = 114 bits (126), Expect = 3e-20 Identities = 162/222 (73%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACG-TTCATTCGCGGA 22490 |||| ||||| |||||||||||||||||||| | || | ||||| || ||| | || Sbjct 435802 AAGAGGAAGGCTGATTGGGCGCTGAAATGGATTTCGGACGA-GAACGCGTCCTTCTCTGA 435860 Query 22491 ACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-CAA 22549 ||||| | || ||||| | || || || || || || |||||| | ||| | | | | Sbjct 435861 GCGTCTCGTCGCCTTTGCGGCCGTCGAGGGTATCTTTTTCTCTGGATC-TTTCGCGTCGA 435919 Query 22550 TCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTA 22609 |||| ||||| || ||||||| | ||||| ||||| || || || || ||| | |||| Sbjct 435920 TCTTCTGGCTGAAGAAACGTGGTCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATTA 435979 Query 22610 GCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTAT 22651 |||| || ||||| | || ||||| ||||| || | |||| Sbjct 435980 GCCGCGACGAGGGCATGCACACCGACTTTGCTTGCCTCCTAT 436021 Score = 89.7 bits (98), Expect = 1e-12 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 22513 GTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-CAATCTTTTGGCTaaaaaaaCGTGC 22571 || |||||||| ||||| ||||| | ||||| | |||| |||||||| || || || | Sbjct 433834 GTCGAAGGCATATTCTTCTCTGG-GTGTTTTGCGTCAATATTTTGGCTCAAGAAGCGCGG 433776 Query 22572 AATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATAC 22631 | ||||| ||| |||| || || || ||| | || || || ||||| || | || || Sbjct 433775 GCTCATGCCTGGTTTAACCTTCTCCAACGAGCTCATCAGTCGTGATGAAGGCATGCACAC 433716 Query 22632 CGATTTTGCGTGTATGCT 22649 ||| |||||||||||||| Sbjct 433715 CGACTTTGCGTGTATGCT 433698 >seq616 Length=116746 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || ||||| ||||| | || || ||||| |||| | ||| ||||||| |||| || Sbjct 86903 GGTTACTCAAATGGCATTGTCCCTATGCTCCGTGCATATGATGCTACTGCGCGGTATGTT 86844 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||||||||| ||||| || || || || || || ||||||| || || Sbjct 86843 GACCAGGGTGGCAATAAGCGTCCTGGTGCCTTCGCCATCTACATCGAGCCATGGCACGCA 86784 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 ||| ||||||| || ||||| ||||| || ||| ||||| |||||| | ||||| | Sbjct 86783 GATGTTTTTGAATTCCTTGATCTCCGCAAGAACCACGGAAAGGAGGAAGTCCGTGCGAGG 86724 Query 363934 GATCTGTTCTATGCACTTTGG 363954 || ||||||| || |||||| Sbjct 86723 GACTTGTTCTACGCTCTTTGG 86703 Score = 89.7 bits (98), Expect = 1e-12 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 364391 TTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCC 364450 ||||||| || || || || || || || || |||||||||||||||||||||| Sbjct 86150 TTATCGATGTCAACTACTACCCTATCCCCGAGGCTCGTCGTTCTAATATGCGTCATCGCC 86091 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510 | |||||| | |||||||||||||| || || | || ||| | || ||| | |||| Sbjct 86090 CTATTGGTGTCGGTGTACAGGGCCTTGCAGATGCGTTCATGGCTTTGAAAATGCCGTTTG 86031 Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559 | || | || || | | || |||||| ||||||| || || || || Sbjct 86030 AATCCGCAGAAGCGAGAATGCTCAATAAGCAGATCTTCGAGACGATCTA 85982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303303185060858