Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1814 143 3e-29 >seq1814 Length=443622 Score = 143 bits (158), Expect = 3e-29 Identities = 376/565 (67%), Gaps = 14/565 (2%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 || ||| || || ||| ||| | || || || | ||| || | |||||||| || || Sbjct 433700 CATACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGT 433759 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 | || ||||| || || ||||| || ||||||||||| |||||||| | ||||| || Sbjct 433760 TAAACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCAGAGAA 433819 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG--GCGCT---G 32831 ||| || ||||| |||||||| || || | | | ||| | ||| || | || | Sbjct 433820 GAATATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGC--TAAACGATGACCTCTCG 433877 Query 32832 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 32891 || |||||| | ||||| || || |||||||| | || || || || ||| Sbjct 433878 TCCGAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATA 433937 Query 32892 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 32951 ||| |||| | || | | | | ||||| | || || ||||||| | || | Sbjct 433938 GCAGTAAACAAGTACTCCCGCTGGTGAGAGTCTTTGATGTAGGTGTCAATCAGTA-ACGA 433996 Query 32952 -TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010 ||| |||| || || ||||| || || | ||| || ||||| || |||| ||| || Sbjct 433997 GTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTC 434056 Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 33070 || | ||| || || | | || ||||| | | |||||||| || || ||||| Sbjct 434057 GGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGTCTGA 434116 Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT-- 33127 ||| || ||||| || | ||| ||| || || | |||| | | || ||||||| Sbjct 434117 GGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGT-TTAGTTTGT 434175 Query 33128 -ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 | |||||| || || | || |||| ||| ||| | ||||| || || |||| Sbjct 434176 CGTGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCT 434235 Query 33187 CTGCCTTTTTATACATATTCCAGAT 33211 | |||||||| ||||| | |||||| Sbjct 434236 CGGCCTTTTTGTACATTTGCCAGAT 434260 Score = 127 bits (140), Expect = 3e-24 Identities = 293/439 (67%), Gaps = 7/439 (2%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| | |||||||| | ||||| | ||||| || || ||||| Sbjct 436013 CAAGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGA 435954 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || ||||| || || ||||| || || ||||| || |||||||| || || Sbjct 435953 CCGGGCATCAGACCACGTTTCTTCAGCCAGAAGATCGACGCGAAAGATCCAGAGAAAAAG 435894 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 32837 || || || || ||||||||||| | || | ||| | || | ||| || || Sbjct 435893 ATACCCTCGACGGCCGCAAAGGCGACGAGACGCTC-AGAGAA-GGACGCGTTCTCGTCCG 435836 Query 32838 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 32895 ||||| || | |||||||| |||||| | || || ||||| || ||||| || |||| Sbjct 435835 AAATCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCAT 435776 Query 32896 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 32955 ||||| || | | || || || | || || || || | || || Sbjct 435775 CGAAGAGGTATTCACGCTGCTTCGGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATG 435716 Query 32956 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAA 33015 | || || || ||||| || || ||||| || || ||||| | | ||||||| | Sbjct 435715 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAGCCATAGAACGACCGCGCCTCGGCAC 435656 Query 33016 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075 || ||||| | | |||||||| || || || || || || |||||| || | Sbjct 435655 ATTGGACTTCAGAGGAGAATCGTTCAAGCAAGTTCTCGTTAACGATACCGTCAGACGCAG 435596 Query 33076 CAAAAAACGCCAATACATG 33094 |||| || |||| ||||| Sbjct 435595 CAAAGAAGGCCAGAACATG 435577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633608088312400