Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq454 113 4e-20 seq221 113 4e-20 >seq454 Length=96760 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || |||||| | || || || |||| ||| | || || |||||||| Sbjct 79967 AATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACCATTACATTGGAGGTTGAGTCGTC 79908 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || ||||| | || | ||| || || ||||||||||| || || | Sbjct 79907 GGACACCATTGACAATGTGAAGGCCAAGATTCAA-GATAAGGAAGGGATTCCTCCAGATC 79849 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || ||||| ||||| ||| | || |||| ||| || | |||||||| Sbjct 79848 AACAGCGCTTGATCTTTGCTGGCAAGCAACTTGAGGATGGTCGGACGCTTTCCGATTACA 79789 Query 25177 ATATTCAAAAAGAATCCACGCTACAT 25202 |||| || || ||| |||||| ||| Sbjct 79788 ATATCCAGAAGGAAAGCACGCTTCAT 79763 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | || ||| | || || ||||||||| Sbjct 80701 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTCGAGTCGTCT 80642 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| || || || || || ||||| || || Sbjct 80641 GACACGATCGACAATGTGAAGGCGAAGATTCAG-GATAAGGAGGGTATCCCACCCGATCA 80583 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| |||| || || || ||||| | || |||| |||||| || ||||||||| Sbjct 80582 ACAGCGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACGCTGTCCGATTACAA 80523 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || ||||| || ||| | || || Sbjct 80522 TATCCAGAAGGAGTCCACCCTTCATCTTGTCCT 80490 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | || ||| | || || || ||||| Sbjct 80473 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTTGAATCGTCC 80414 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || |||| || | ||| || || || || |||||||| || Sbjct 80413 GACACGATCGA--CAATGTGAAAGCGAAGATTCAG-GATAAGGAGGGCATTCCACCAGAT 80357 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| |||| || || || || || | || |||| |||||| || ||| ||| Sbjct 80356 CAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTGTCCGACTAC 80297 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 |||||||| || || || || || || Sbjct 80296 AATATTCAGAAGGAGTCTACTCTTCA 80271 >seq221 Length=41398 Score = 113 bits (124), Expect = 4e-20 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||||||| || ||||||| | || || ||||| ||| Sbjct 38111 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 38052 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || | || || | ||| ||||| || || ||||| || ||| Sbjct 38051 GACACCATCGA--CAATGTCAAGGCTAAGATTCAA-GACAAGGAGGGTATTCCTCCCGAC 37995 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || || ||||| ||| | || |||| |||||| | ||||||| Sbjct 37994 CAACAGCGTTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTTTCCGATTAC 37935 Query 25176 AATATTCAAAAAGA 25189 || || || || || Sbjct 37934 AACATCCAGAAGGA 37921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433312056102485