Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq616 141 2e-28 seq1814 127 4e-24 seq1120 116 8e-21 seq1294 102 2e-16 >seq616 Length=116746 Score = 141 bits (156), Expect = 2e-28 Identities = 428/647 (66%), Gaps = 17/647 (3%) Strand=Plus/Plus Query 293106 GTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGT 293165 ||||| |||||| |||| || ||||| |||||||| ||||||||||| | || | Sbjct 85462 GTTCAAGCTCTGACTCTGGCAGATGAAGGCGCCACGATCCGCAGCGAGGTCTAGGACCTT 85521 Query 293166 CTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAAT 293225 |||| ||||||||| |||||||| | |||||||| || | || || || Sbjct 85522 CTTCTGGCTGATCTCCCAGACGGTCTTGTAGATAGCCTTGACGTCGTCGGGGATACCGAT 85581 Query 293226 AACCTTCTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AG 293284 | |||||||||| || |||||| |||||| ||| |||||| ||| ||| || Sbjct 85582 GATGCTCTGGATAGAGCCGTTGTTGGCGATAATCATGTTTTTCATTTGGTCGTCCCAGAG 85641 Query 293285 TCCCACGAG--CAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGC 293342 | ||| | | ||||||||||| || | | | ||| || ||||||| || || Sbjct 85642 ---CTTGAGGTCCACGAGCTCGCGGAGGAGCCATGGGCAGACGACCTGGAACTCGCCGGC 85698 Query 293343 GAGAGTGCGACGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCA 293402 |||| || || |||| ||||| ||| ||| || | || | | || | || Sbjct 85699 GAGAACACGGCGAGTGTAGATGTTGCTGGTGTAGGGCTC-GAAGCATTCATTGAAACCCA 85757 Query 293403 A-ATCTGAGCAGTAGATGCGGTAGGCATAAGAGC-AGTCGTCAGAGAGTTCCTCACACCC 293460 | || ||| ||||| || |||||||| |||| || | || |||||||||| ||| Sbjct 85758 AGATTTGACTGGTAGACGCCGTAGGCATGGGAGCGAGGAG-AAGGGAGTTCCTCAGACCT 85816 Query 293461 TTCTTGACACGCGATTC---GAGACCCGCCCAGT-CCAGAGCAGTCTGAGGTGTAACACC 293516 || || || | ||| | || | ||||| |||||| | | ||||| || || Sbjct 85817 GTCCTGGCAATCTTTTCCTTCAAACTAGTCCAGTCCCAGAG-ATCCGTTGGTGTCACGCC 85875 Query 293517 CCAGAGATGATACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGG 293576 |||||||| |||| | |||||| || || ||||| | || || || Sbjct 85876 CCAGAGATCGAACTGGAGCTGTCCCTTGGATGCCGGGCTACCCTCCCACGTCTCATATGG 85935 Query 293577 GCCATGCTCATCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAA 293636 |||| | | | || || ||||| ||||| | ||||| ||| || |||||| Sbjct 85936 ACCATCCACTTGAGCGATCTCGCTGCTGGCCTCCAATGCAGCGTGGTAGATCGTCTCGAA 85995 Query 293637 GATCTCACGGTTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAA 293696 ||||| |||||| | | || | | || ||||||||||| |||| | ||| Sbjct 85996 GATCTGCTTATTGAGCATTCTCGCTTCTGCGGATTCAAACGGCATTTTCAAAGCCATGAA 86055 Query 293697 CACATCCTGC-AGACCCTGTACACCTACACCAACGGGGCGACGACGC 293742 | ||| |||| || ||||||||||| ||||||| |||||| ||||| Sbjct 86056 CGCAT-CTGCAAGGCCCTGTACACCGACACCAATAGGGCGATGACGC 86101 >seq1814 Length=443622 Score = 127 bits (140), Expect = 4e-24 Identities = 362/543 (67%), Gaps = 19/543 (3%) Strand=Plus/Minus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| ||||||||||| || |||| |||||| || | || || ||||||| || Sbjct 435999 GTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGACC 435940 Query 251904 ACGGTTCCTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACAC 251962 ||| ||| | ||||||||||| | ||| |||| |||||||||| | | ||||||||| Sbjct 435939 ACGTTTCTTCAGCCAGAAGATCGACGCGAAAG-ATCCAGAGAAAAAGATACCCTCGACGG 435881 Query 251963 ACACCCATGCAACAAGGCGCTCAGCAAACGAC---TTGTCCTGCGACAAGAACTTCTGTG 252019 | | | || || || ||||||| || ||| || || | ||| | | ||| | | Sbjct 435880 CCGCAAAGGCGACGAGACGCTCAGAGAAGGACGCGTTCTCGTCCGAAATCCATTTCAGCG 435821 Query 252020 CCCATGCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCC 252079 |||| | |||||| | || ||||| || ||||| ||||| ||||| | | | Sbjct 435820 CCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCGAAGAGGTATTCAC 435761 Query 252080 GCTCGGCATCG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGAT 252137 ||| || ||| |||| |||| || || | ||||| ||||| |||| || ||||| Sbjct 435760 GCT--GCTTCGGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGGAT 435703 Query 252138 GGATTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGT-GACTTCCG 252196 | || | | || ||| | ||||||| ||||| || | | |||||| | Sbjct 435702 GTTCTCCATCATGATTTGGAAGCCATAGAACGACCGCGC-CTCGGCACATTGGACTTCAG 435644 Query 252197 TGGAAAAGTTGTT--TGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCC 252254 ||| || | ||| |||| |||||| | || || || || | ||||||||| | Sbjct 435643 AGGAGAA-TCGTTCAAGCAA-GTTCTCGTTAACGATACCGTCAGACGCAGCAAAGAAGGC 435586 Query 252255 AAGAATGGTCTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAAT 252314 |||| | || |||||||||||||| || || || || ||||||| || Sbjct 435585 CAGAACATGCGAGACGAAGTGACGCTCATTATCATTAAGGCGGTTGTTCCAGTCGTGAAG 435526 Query 252315 GTCCTGATTCAGAGGAACTTCT--TCCACCGTCCAGAATGTGGACACCGCCTTCTTGTAC 252372 ||||| || | ||| | ||| || |||||||||| | | | |||||||||| Sbjct 435525 GTCCT--TTGACAGGTCCATCTCCTCGGCCGTCCAGAACGACGCTTCGTGCTTCTTGTAC 435468 Query 252373 ATT 252375 ||| Sbjct 435467 ATT 435465 >seq1120 Length=21618 Score = 116 bits (128), Expect = 8e-21 Identities = 162/223 (73%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || ||| |||| | || ||||||||| | || ||||| || || ||||| | || Sbjct 18160 CTCTCGTGTTGCTGTCCTCGGTCCCAATGGTTCCGGAAAGTCCACGCTGGTCAAACTTCT 18219 Query 280220 GACTGGCGAGACCCAGGCCA-CTGAGG-GGTCCGTT-TGGAAGCATCCCAACATGCGGAT 280276 | || || | | || ||| ||| || ||| | |||||||| |||||| || || Sbjct 18220 TATCGGTGACAGCGAGCCCAACTGCGGTGGTGAGACCTGGAAGCACCCCAACTTGGTTAT 18279 Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAA 280336 | |||||||||||||||||||||||| ||||| || |||||||| |||| ||||||| Sbjct 18280 CGGTTACGTCGCTCAGCACGCTTTCCATCACATTGATAACCACCTTGACAAGACTCCTCT 18339 Query 280337 CCAATACATTCAGTGGCGCTATGCAAGTGGGCAGGATCTGGAG 280379 | ||||| |||||| || | ||| ||||||| ||| Sbjct 18340 GGAGTACATGTTGTGGCGTTACCAGACTGGTGAGGATCTCGAG 18382 >seq1294 Length=32672 Score = 102 bits (112), Expect = 2e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757 ||||||||||| ||||| ||| || | |||| || | || || || ||| | Sbjct 14007 TACCATCACGGAGAGCAAAGTTTGATGTCCACCATCGTTAATCTCGCTCAAGATTATATT 13948 Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGT 218817 ||||| ||||| || ||||| ||| | ||||| |||||||| ||| ||||| |||| Sbjct 13947 GGCAGCAACAATATCAACTTACTGATGCCCAATGGTCAGTTCGGTACTCGTGACCAGGGT 13888 Query 218818 GGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACA 218853 |||||||| |||||| |||||||||||||| ||| Sbjct 13887 GGAAAGGACCATGCTTCCGCCAGGTATATCTTCACA 13852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027797042308979