Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1814 250 5e-61 >seq1814 Length=443622 Score = 250 bits (276), Expect = 5e-61 Identities = 379/531 (71%), Gaps = 9/531 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 ||||||||||| || || |||||||| || || || |||||| || | ||| Sbjct 435583 CTGGCCTTCTTTGCTGCGTCTGACGGTATCGTTAACGAGAACTTGCTTGAACGATTCTCC 435642 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || || | |||||||| | ||||| |||||||| || || |||||| Sbjct 435643 TCTGAAGTCCAATGTGCCGAGGCGCGGTCGTTCTATGGCTTCCAAATCATGATGGAGAAC 435702 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||| || || || ||||||||||| ||| || ||||| Sbjct 435703 ATCCACTCCGAGACATACTCCCTCCTCATCGACACGTACATCAAGGAACCGAAGCAGCGT 435762 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | || ||| | ||||| ||||| || || ||| |||||| |||||| || |||||| Sbjct 435763 GAATACCTCTTCGATGCCATCGAGACTATCCCTTGCGTCAAGAGGAAGGCTGATTGGGCG 435822 Query 42663 CTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 || || ||||| | | | || ||| | ||| ||| | || || |||||| | || Sbjct 435823 CTGAAATGGATTTCG-GACGAGAACGCGTCCTTCTCTGAGCGTCTCGTCGCCTTTGCGGC 435881 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781 ||||||||| ||||| ||||| || | ||||| || ||||||||||| ||| | | | Sbjct 435882 CGTCGAGGGTATCTTTTTCTCTGGATCTTTCGCGTCGATCTTCTGGCTGAAGAA-ACGTG 435940 Query 42782 GTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 ||| ||||||||| ||||||||||||||||| ||||| ||| | |||||||| |||| | Sbjct 435941 GTCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATTAGCCGCGACGAGGGCATGCACA 436000 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC-ACAAGCCCTCGAAGGAGCGG 42899 |||||||| |||||||| ||||| |||||||||| | ||| | | | || Sbjct 436001 CCGACTTTGCTTGCCTCCTATTCTC---TCACCTCAGGCGGCGAGCGCACCCA-GATGTC 436056 Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||||| || |||||||| ||||| |||| || || | |||||||||||| Sbjct 436057 GTCCGTGCTATCATCACTGAGGCTGTGGGCATTGAACAAGAGTTCCTCACG 436107 Score = 141 bits (156), Expect = 2e-28 Identities = 295/437 (68%), Gaps = 2/437 (0%) Strand=Plus/Minus Query 42418 ACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGT 42477 || |||| ||||| ||||||||||| ||||| || || ||||| ||||| | | ||| Sbjct 434139 ACGTACTAGCCTTTTTCGCCGCCTCAGACGGTATTGTAAATGAAAACCTCGTCGAACGGT 434080 Query 42478 TCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAG 42537 || || ||||| ||| || || || || || ||||||||||| | || | Sbjct 434079 TCTCCAATGAGGTCCAGGTGGCCGAAGCTCGATGTTTTTACGGCTTCCAAGTCATGATGG 434020 Query 42538 AGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCG 42597 ||||| | ||||| || |||| | |||| | |||| |||||| || | | Sbjct 434019 AGAACATACACTCCGAAACGTACTCGTTACTGATTGACACCTACATCAAAGACTCTCACC 433960 Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657 |||| | |||| | || || || ||||| || |||||| ||||| || |||| Sbjct 433959 AGCGGGAGTACTTGTTTACTGCTATCGACACGATTCCGGCCATCAAAAAGAAAGCAGACT 433900 Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 |||| || ||||| | | | || | || |||| ||||| || |||| || || Sbjct 433899 GGGCACTGCGGTGGATTTCG-GACGAGAGGTCATCGTTTAGCGAGCGGTTGGTGGCGTTC 433841 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 | || ||||| ||||| |||||||| || || || || || || ||||||||| || Sbjct 433840 GCGGCAGTCGAAGGCATATTCTTCTCTGGGTGTTTTGCGTCAATATTTTGGCTCAAGAAG 433781 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 | | ||||| || | |||||||| ||||| |||||||| | || || || || Sbjct 433780 CGCGGGCTCATGCCTGGTTTAACCTTCTCCAACGAGCTCATCAGTCGTGATGAAGGCATG 433721 Query 42837 CATAGGGACTTTGCCTG 42853 || | |||||||| || Sbjct 433720 CACACCGACTTTGCGTG 433704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944303562999440