Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq221 98.7 8e-16 seq454 91.5 1e-13 >seq221 Length=41398 Score = 98.7 bits (108), Expect = 8e-16 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 || ||| || | || || || || || ||||| |||||||||||||| ||||||||||| Sbjct 37040 GAGACCGCCACGGAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATC 37099 Query 33957 TGCCAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCA 34015 | || || || |||| ||||| ||||||||||| || |||||||||||||| ||| Sbjct 37100 AG-AAAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCG 37158 Query 34016 CCGGCACGCTCTCTTTGTCCATAATTTT 34043 || | | ||| |||||| ||| || Sbjct 37159 GAGGAATACCCTCCTTGTCCTGAATCTT 37186 >seq454 Length=96760 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||||| || || || || || ||||| ||| ||||||||| ||||||||||| | Sbjct 79968 CCTCCTCGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAG 80027 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | | || |||| || | ||||||||| ||||| || || || ||||| || || Sbjct 80028 AGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGA 80087 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTT--AATGGAACTC-ACACTATCAGTAGATTCG 34077 | || || |||||| ||| || ||| || | || | |||||| || ||| Sbjct 80088 ATGCCTTCCTTGTCCTGAATCTTCGCCTTTACATTG---TCGATCGTATCAGATGACTCG 80144 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | ||| || || || ||||| || || ||||| ||||||||||| Sbjct 80145 ACTTCAAGCGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397047790461238