Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1814 159 4e-34 seq769 104 3e-17 >seq1814 Length=443622 Score = 159 bits (176), Expect = 4e-34 Identities = 361/525 (69%), Gaps = 17/525 (3%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||||| ||| ||||| || ||||||||| || || Sbjct 436010 GCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCG 435951 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGAAGAT 126165 ||||| ||||| || ||||||| |||||| |||| | | ||| || || ||||| ||||| Sbjct 435950 GGCATCAGACCACGTTTCTTCAGCCAGAAGATCGACGCGAAA-GATCCAGAGAAAAAGAT 435892 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| || ||| || || | ||||||||||| ||||| |||| | || ||| Sbjct 435891 ACCCTCGACGGCCGCAAAGGCGACGAGACGCTCAGAGAAGGA-CGCGTTCTCGTCCGAAA 435833 Query 126226 -CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284 ||| |||| |||||| | ||||| ||| || || |||| |||| ||| || || | Sbjct 435832 TCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCGA 435773 Query 126285 AGAGTTCCTTCTTTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342 |||| | ||| ||| | || || ||||||||| | || ||||| || ||||| Sbjct 435772 AGAGGT-ATTC-ACGCTGCTTCGGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATGT 435715 Query 126343 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC-GCTT 126400 ||| ||||| | | ||| || | || | | ||||| || ||||| || || Sbjct 435714 CTCGGAGTGGATGTTCTCCATCAT-GATTTGGAAGCCATAGAACGACCGCGCCTCGGCAC 435656 Query 126401 ATCTGTACCTCATCGGCAAAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 || || || ||| || | ||| ||| | | ||||| ||| || || || ||| | Sbjct 435655 AT-TGGACTTCAGAGG-AGAATCGTTCAAGCAAGTTCTCGTTAACGATACCGTCAGACGC 435598 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516 |||||| || ||||| | || | | ||| | | ||||| || || | || | || Sbjct 435597 AGCAAAGAAGGCCAGAACATGCGAGACGAAGTGACGCTCATTATCATTAAGGCGGTTGTT 435538 Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| ||| ||||| || || || | |||||| || ||||| Sbjct 435537 CCAGTCGTGAAGGTCCTTTGACAGGTCCATCTCCTCGGCCGTCCA 435493 >seq769 Length=68272 Score = 104 bits (114), Expect = 3e-17 Identities = 217/319 (68%), Gaps = 7/319 (2%) Strand=Plus/Plus Query 10877 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGC 10936 |||||||||||||| | ||| || || | || | ||||||||||| || || Sbjct 2018 AAGCCATCCATCTCCACAAGGAGCTGGTTCAAAGTGTTCTCGCGTTCATCGTTAGCACCG 2077 Query 10937 ATACCACC----CGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 10992 || ||||| || || ||| ||| |||| |||||| |||||||||| |||||| || Sbjct 2078 ATTCCACCTTTTCG-ACCGCGAGCCTTGCCGATGGCGTCGATTTCATCGACGAAAACAAT 2136 Query 10993 ACACGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACAC 11051 || || || ||| || | | |||||| || || || | | ||| |||| Sbjct 2137 GCATGGGGCGTTCTTCTTGGCCGTCG-CAAAGAGGTCCCGTACACGAGACGAACCAACAC 2195 Query 11052 CCACAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCAC 11111 | |||||||||||||| || | | | ||||| || ||| || ||||||| ||| | Sbjct 2196 CGACAAACATTTCCACGAACTCTGAGCCGGAAACCGAGAAGAATGGTACGTTGGCTTCTC 2255 Query 11112 CCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCAC 11171 | || ||||| |||||| | || || ||||| || || |||| || | || | Sbjct 2256 CTGCAGTGGCTTTGGCGAGCAAAGTTTTTCCCGTACCGGGAGGACCTGAAAGGATTGCGC 2315 Query 11172 CACGTGGGATCCTGGCACC 11190 | || |||||| ||||||| Sbjct 2316 CTCGAGGGATCTTGGCACC 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597331057368520