Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq454 120 3e-22 seq221 102 9e-17 seq2162 91.5 2e-13 >seq454 Length=96760 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||||||||| || | ||| || || | || || ||||||||||||||||| Sbjct 80282 CTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAA 80341 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || |||||||| || | ||| | || |||||| ||| ||| | || | ||| | Sbjct 80342 GATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCC-TGAATCTTCGCTTTCACAT 80400 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||||| |||||| || || | || || || |||||||| || ||||| | Sbjct 80401 TGTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGA 80460 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 80461 CGAAGATCTGCAT 80473 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || ||||||||||| | ||| || || | || || ||||| ||||||||||| Sbjct 80510 CTCCTTCTGGATATTGTAATCGGACAGCGTGCGACCATCCTCAAGCTGTTTACCAGCGAA 80569 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||| || |||| ||| | | |||||| ||| ||| | || | || | Sbjct 80570 GATAAGACGCTGTTGATCGGGTGGGATACCCTCCTTATCC-TGAATCTTCGCCTTCACAT 80628 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||| || || || | || || || |||||||| || ||||| | Sbjct 80629 TGTCGATCGTGTCAGACGACTCGACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGA 80688 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 80689 CGAAGATCTGCAT 80701 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| | || || || |||| || || ||||| ||||| || Sbjct 80003 CTCCTTCTGGATGTTGTAATCCGAGAGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAA 80062 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG---TTTGAG 42133 |||||||| |||||||| | || | || ||||||||| ||| | || | || | Sbjct 80063 GATGAGTCGTTGCTGGTCTGGAGGAATGCCTTCCTTGTCC-TGAATCTTCGCCTTTACAT 80121 Query 42134 CGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 |||| | ||| || || || || || | |||||| || ||||| || || ||||| Sbjct 80122 TGTCG--ATCGTATCAGATGACTCGACTTCAAGCGTGATCGTCTTGCCGGTGAGAGTCTT 80179 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 80180 CACGAAGATTTGCAT 80194 >seq221 Length=41398 Score = 102 bits (112), Expect = 9e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || |||||||||| || || || |||| || | |||||| || Sbjct 37074 GTGCTCTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCGTCCTCCAACTGCTTGCCG 37133 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 42130 ||||| || || ||||||||||| | || | | |||||||||| ||| | || | || Sbjct 37134 GCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC-TGAATCTTGGCCTT 37192 Query 42131 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 || | | | ||||| || ||||| || | |||||||| ||||| || | || Sbjct 37193 GACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATGGTCTTGCCGGTCAAGGT 37252 Query 42191 CTTTACAAAGATTTGCAT 42208 ||| || ||||| ||||| Sbjct 37253 CTTGACGAAGATCTGCAT 37270 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || || || |||| || || || | || || |||||||| || Sbjct 37352 GTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCCTCGAGCTGCTTTCCG 37411 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131 ||||| ||||| || || ||||| | || | | |||||||| | || | || | | Sbjct 37412 GCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGT-CTTGGATCTTCGCCTT 37470 Query 42132 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 | ||| | | | |||||| || ||||| || | |||||||| || || || | || Sbjct 37471 AACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCAGTCAAGGT 37530 Query 42191 CTTTACAAAGATTTGCAT 42208 ||| || ||||| ||||| Sbjct 37531 CTTGACGAAGATCTGCAT 37548 >seq2162 Length=51060 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | ||| ||||||||| || ||||| || ||||| ||| | Sbjct 4663 ACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGCCC 4722 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||| ||||| || | ||||||||||| | || | || ||||| Sbjct 4723 ATCCTCAAGCTGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCTTCCTT 4782 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 |||| ||| || |||| | | | ||||| || || || |||| ||||| Sbjct 4783 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCGAGAGTGAT 4842 Query 42173 GGTTTTGCCCGTTAG 42187 |||||| ||||| || Sbjct 4843 GGTTTTACCCGTGAG 4857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543192300506960