Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq454 132 5e-26 seq221 114 1e-20 >seq454 Length=96760 Score = 132 bits (146), Expect = 5e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || || || || || ||||||||||| | || || || |||| Sbjct 79982 AAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGTGTACGACCGTC 80041 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| |||||||| ||| | ||||| || |||||||| |||||||| ||||| || || Sbjct 80042 TTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGAATGCCTTCCTTGTC 80101 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||||||| || | |||||| | || ||||| | || | || Sbjct 80102 CTGAATCTTCGCCTTTACATTGTCGATCGTATCAGATGACTCGACTTCAAGCGTGATCGT 80161 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | ||| || ||||| |||||||| Sbjct 80162 CTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 >seq221 Length=41398 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | ||| || || |||| || || || || ||||||||||| | Sbjct 37043 ACCGCCACGGAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGA 37102 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || | |||||||||||| | || || ||||||||||| ||||| Sbjct 37103 AAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGG 37162 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || ||| || ||||| Sbjct 37163 AATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTGTCAGAGGACTCCAC 37222 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||||||||| || || ||||| || ||||| Sbjct 37223 CTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 37270 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || ||||||||||| | | ||||| | || || || |||||||| || | Sbjct 37921 TCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAAG 37980 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | ||||| |||||||||||||| || || || ||||| || || ||| ||| Sbjct 37981 ATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATCTTAGCCTTGACATTG 38040 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || ||| || || || || | || | ||||||||||||||| || || || Sbjct 38041 TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACA 38100 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 38101 AAGATCTGCAT 38111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || ||||| || || | | ||| || | || || |||||||| ||||| | Sbjct 37358 TCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCCTCGAGCTGCTTTCCGGCGAAG 37417 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| || || ||||| ||||||||||| || || ||||| || || ||| || Sbjct 37418 ATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATCTTCGCCTTAACGTTG 37477 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || || ||||| || | || | |||||| || ||||| || || ||| Sbjct 37478 TCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCAGTCAAGGTCTTGACG 37537 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 37538 AAGATCTGCAT 37548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499625944654360