Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2162 96.9 3e-15 seq1814 96.9 3e-15 seq221 96.9 3e-15 seq454 91.5 1e-13 >seq2162 Length=51060 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | ||||||||||| |||||||||||||| Sbjct 4652 CCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTG 4711 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| ||| ||||| || || ||||| | |||| | ||||| ||||| || || Sbjct 4712 AGAGTGCGCCCATCCTCAAGCTGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGA 4771 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | |||| || | |||||| | ||||| || Sbjct 4772 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG-TCGATGGTGTCTGAGGACTCAAC 4830 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAG 138593 ||||| || | |||||||| || || Sbjct 4831 CTCGAGAGTGATGGTTTTACCCGTGAG 4857 >seq1814 Length=443622 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGC-GCAGTCCATGTGCGAGTACATCGAGTT 52708 ||| || |||| || || | |||||||| || ||| || ||| | ||||||| ||||| Sbjct 433552 GCGTTGTCGGTGGACCTTATCGGCATGAATGCAGCACTC-ATGAGTCAGTACATTGAGTT 433494 Query 52709 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCC 52768 ||| || || |||||| | | ||||| | || ||| | | ||| | |||||| Sbjct 433493 TGTTGCAGACCGTCTGCTCGAATCTCTCGGCAACCCCAAGCATTACAAGTCCACCAATCC 433434 Query 52769 GTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 ||||| |||||| ||| || || ||| |||| ||||||||||| || ||||| ||||| Sbjct 433433 CTTTGACTTTATGGACATGATCTCCCTTCAGGGGAAGACCAACTTCTTTGAGAAACGAGT 433374 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTT 52709 || || || |||| || | |||||||| || || ||||||| | ||||| ||||| Sbjct 436165 GCTCTCCCTGTCGGACTTATCGGCATGAATGCCAAGCTCATGTGCCAATACATTGAGTTC 436224 Query 52710 GTGGCGGATCGTCTG-TTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCC 52768 || || || ||| || ||| ||| | | ||| |||| || | | ||| ||| || Sbjct 436225 GTCGCTGACCGTTTGCTTGTTGCTCTTGGTGCAACCAAGGTG-TACGACGTCACCAACCC 436283 Query 52769 GTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 ||||| || ||| ||| || ||||| |||||||||||||||| ||||||||||| || Sbjct 436284 CTTTGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGT 436343 Query 52829 C 52829 | Sbjct 436344 C 436344 >seq221 Length=41398 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||| ||||| | ||||| |||||||| || || |||| | Sbjct 37357 CTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCCTCGAGCTGCTTTCCGGCGAA 37416 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| ||||| |||||||| ||||| || || || ||||| ||| || | |||| | Sbjct 37417 GATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATCTTC-GCCTTAACGT 37475 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 ||| | | |||||||| ||||||||||| | || | || |||||||||| || || Sbjct 37476 TGT-CGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCAGTCAAGGTCTTG 37534 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 37535 ACGAAGATCTGCAT 37548 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||| ||| | ||| || ||||||||||| || || | | Sbjct 37920 CTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAA 37979 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 ||| | |||||||||||| ||||| ||||| || ||||| ||| | || | || || Sbjct 37980 GATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTC-TTGAATCTTAGCCTTGACAT 38038 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | ||||| ||||| | || | || || || |||| || || Sbjct 38039 TG-TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTC 38097 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 38098 ACAAAGATCTGCAT 38111 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/199 (71%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAA 138480 |||||| || ||||| ||||| | ||| |||| |||||||| || || |||| Sbjct 37635 CTCCTTCTGGATGTTATAGTCAG--AGAGTGTGCGACCATCCTCGAGCTGCTTTCCGGCG 37692 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| ||||| |||||||| ||||| || || || ||||| ||| ||| || | | Sbjct 37693 AAGATGAGACGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACA 37752 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | ||||| ||||| | || | || || || || || || || Sbjct 37753 TTGT-CGATGGTGTCAGAGGACTCGACCTCAAGGGTGATAGTCTTGCCCGTGAGCGTCTT 37811 Query 138600 TACAAAAATCTGCATGGCT 138618 || |||||||||||| || Sbjct 37812 GACGAAAATCTGCATGCCT 37830 >seq454 Length=96760 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||| | || | ||| | | | |||||||| || || ||||| ||| Sbjct 80474 GCCGCCACGAAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGA 80533 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||||| || |||||||| | |||| ||||||||||| || || || Sbjct 80534 CAGCGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATAAGACGCTGTTGATCGGGTGG 80593 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || || || ||| | || | || |||| || | ||||| | |||||| Sbjct 80594 GATACCCTCCTTATC-CTGAATCTTCGCCTTCACATTG-TCGATCGTGTCAGACGACTCG 80651 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | || | ||| || || || || || || || || ||||||||| Sbjct 80652 ACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 80702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496243672297680