Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq221 86.0 4e-12 seq2162 84.2 2e-11 >seq221 Length=41398 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045 || || || |||||||||||| ||| | | | || || | ||| ||||||||| | Sbjct 37921 TCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAAG 37980 Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105 |||||||||||||||||| ||||| || |||||||| ||| || || ||| | Sbjct 37981 ATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATCTTAGCCTTGACATTG 38040 Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165 || || || || || || || | ||| ||||| || || |||| || || ||| Sbjct 38041 TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACA 38100 Query 15166 AAAATTTGCATA 15177 || || |||||| Sbjct 38101 AAGATCTGCATA 38112 >seq2162 Length=51060 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||||||| || || ||||| |||||||| ||||||||| | | | | || || Sbjct 4670 ACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGCCCATCCTCA 4729 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 | || || || ||| | ||||| ||||| ||||| ||||| ||||||||||| Sbjct 4730 AGCTGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 4785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357378850096415