Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq454 118 1e-21 seq221 107 2e-18 >seq454 Length=96760 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||||||| || ||||||| ||| || |||||||| ||| Sbjct 80505 GTGGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGACCATCCTCAAGCTGTTTACCA 80564 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||| |||||||| || || |||||||| ||| || ||| ||| Sbjct 80565 GCGAAGATAAGACGCTGTTGATCGGGTGGGATACCCTCCTTATCCTGAATCTTCGCCTTC 80624 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| || | || | ||| ||||| || || || Sbjct 80625 ACATTGTCGATCGTGTCAGACGACTCGACCTCCAATGTAATCGTCTTGCCCGTGAGGGTC 80684 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 80685 TTGACGAAGATCTGCATG 80702 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||||||||| ||| || ||||||| ||| || ||||| || ||| Sbjct 80277 GTAGACTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGCTGCTTACCA 80336 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||| || || ||||||||||| ||| || ||| || Sbjct 80337 GCGAAGATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCCTGAATCTTCGCTTTC 80396 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | || || || | || | ||| ||||| || || || Sbjct 80397 ACATTGTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCCCGTGAGGGTC 80456 Query 127097 TTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 80457 TTGACGAAGATCTGCATG 80474 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 126923 TCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAG 126982 || || || |||||||||||| | ||| ||| ||| || || || || ||||| || Sbjct 79776 TCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCTCAAGTTGCTTGCCAGCAAAG 79835 Query 126983 ATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGT 127042 ||||| ||||| ||||| ||||| || || ||||| || || || ||| | | Sbjct 79836 ATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTGAATCTTGGCCTTCACATTG 79895 Query 127043 TCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 127102 || | |||||||| ||| || || | || | || ||||| || ||||| || || Sbjct 79896 TCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCTTGCCAGTAAGAGTCTTCACG 79955 Query 127103 AAAATCTGCAT 127113 || |||||||| Sbjct 79956 AAGATCTGCAT 79966 >seq221 Length=41398 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||||||| | ||||| ||| || || || || |||||| | Sbjct 37920 CTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAA 37979 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||||| ||||| || |||||||| || ||||||||||| || || ||||| | Sbjct 37980 GATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATCTTAGCCTTGACATT 38039 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| |||||| | |||||| || | ||| | || |||||||||| || || || Sbjct 38040 GTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCAC 38099 Query 127102 AAAAATCTGCAT 127113 ||| |||||||| Sbjct 38100 AAAGATCTGCAT 38111 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 126950 GTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATG 127009 |||||| ||| || ||||| ||||| ||| |||| | || || || || ||||| ||| Sbjct 37663 GTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGGATG 37722 Query 127010 CCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCG 127069 ||||||||||| ||| || ||||| | |||| |||||| | |||||| || Sbjct 37723 CCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCA 37782 Query 127070 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | ||| | || ||||| || || || || || |||||||||||| || Sbjct 37783 AGGGTGATAGTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCATGCCT 37830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475482855788560