Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1294 89.7 6e-13 seq769 86.0 8e-12 >seq1294 Length=32672 Score = 89.7 bits (98), Expect = 6e-13 Identities = 96/123 (78%), Gaps = 8/123 (7%) Strand=Plus/Plus Query 177719 AACTCCGAGGAGTAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACC-AACAAT 177777 ||||||| |||||||||||| | |||||| ||||| |||||||| | ||| || |||| Sbjct 16110 AACTCCGTGGAGTAGATGTTGGCCAACTTAGCACCATAGCCATTCCTTCCGCCTGTCAAT 16169 Query 177778 TCTCTTCTTGTTGTCATCGTAGTTTGTACTC---GTGAGAAGGTGACCAAAGGTAAGTTC 177834 | |||||| || ||| ||||| | ||||| | ||| |||||||||||| | || || Sbjct 16170 T-TCTTCTCGTCGTCGTCGTAAT---TACTCGAGGAGAGTAGGTGACCAAAGATGAGCTC 16225 Query 177835 TGG 177837 ||| Sbjct 16226 TGG 16228 >seq769 Length=68272 Score = 86.0 bits (94), Expect = 8e-12 Identities = 214/321 (67%), Gaps = 7/321 (2%) Strand=Plus/Plus Query 12790 CGAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGG 12849 |||||||||||||||| | ||| || || | || | || |||||||| || || Sbjct 2016 CGAAGCCATCCATCTCCACAAGGAGCTGGTTCAAAGTGTTCTCGCGTTCATCGTTAGCAC 2075 Query 12850 GCATACCACC----CGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACG 12905 || ||||| || || ||| ||| |||| |||||| ||||| || | |||||| Sbjct 2076 CGATTCCACCTTTTCG-ACCGCGAGCCTTGCCGATGGCGTCGATTTCATCGACGAAAACA 2134 Query 12906 ATACA-CGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGAC 12964 || || || | | ||| || | | |||||| || || || | | ||| || Sbjct 2135 ATGCATGGGGCGTTCTTCTTGGCCGTC-GCAAAGAGGTCCCGTACACGAGACGAACCAAC 2193 Query 12965 ACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTC 13024 ||| |||||||| ||||| || | | | ||||| || ||| || ||||||| ||| Sbjct 2194 ACCGACAAACATTTCCACGAACTCTGAGCCGGAAACCGAGAAGAATGGTACGTTGGCTTC 2253 Query 13025 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGC 13084 || || ||||| |||||| | || || ||||| || || || | || | || Sbjct 2254 TCCTGCAGTGGCTTTGGCGAGCAAAGTTTTTCCCGTACCGGGAGGACCTGAAAGGATTGC 2313 Query 13085 ACCACGTGGGATCCTGGCACC 13105 || || |||||| ||||||| Sbjct 2314 GCCTCGAGGGATCTTGGCACC 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613484047772040