Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq221 129 7e-25 seq2162 114 1e-20 seq454 113 5e-20 >seq221 Length=41398 Score = 129 bits (142), Expect = 7e-25 Identities = 162/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 46375 TAAACGCAACA---CCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGT 46431 |||| |||||| | || || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct 37890 TAAATGCAACATACCAAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGT 37949 Query 46432 GCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCT 46491 ||| | || ||||| |||||||| ||||| ||||| ||||| ||||||| || | | Sbjct 37950 GCGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACC 38009 Query 46492 CTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCAC 46551 ||||||||| ||||| ||||| | | | ||||| || || || || | Sbjct 38010 CTCCTTGTCTTGAATCTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAG 38069 Query 46552 CGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| ||||| |||| || || |||||||| ||||| Sbjct 38070 GGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 38111 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| ||||| || || || ||||| |||| || | |||||||||| Sbjct 37074 GTGCTCTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCGTCCTCCAACTGCTTGCCG 37133 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| |||| |||||||||||| | || | | |||||||||| ||||| |||| Sbjct 37134 GCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTG 37193 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | ||||| || ||||| || | |||||||| ||||| |||| || Sbjct 37194 ACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTC 37253 Query 46577 TTAACAAAGATTTGCAT 46593 || || ||||| ||||| Sbjct 37254 TTGACGAAGATCTGCAT 37270 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 |||||||| ||||||||||| ||||| || ||||| || || ||||| | || |||||| Sbjct 37621 AGATGCAAAGTACTCTCCTTCTGGATGTTATAGTCAGAGAGTGTGCGACCATCCTCGAGC 37680 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 ||||| |||||||| || | || || ||||| | || | || ||||||||| |||| Sbjct 37681 TGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATC 37740 Query 46508 TTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCC 46567 || ||||| | | | ||||| || || || || | ||||| || |||||| Sbjct 37741 TTTGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATAGTCTTGCCC 37800 Query 46568 GTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || || ||||| Sbjct 37801 GTGAGCGTCTTGACGAAAATCTGCAT 37826 Score = 104 bits (114), Expect = 3e-17 Identities = 153/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 46383 ACACC-AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCG 46441 ||||| || || | || |||||||| ||||| || ||||| || || || || | || Sbjct 37337 ACACCGAGGTGAAGAGTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCC 37396 Query 46442 TCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 46501 ||||||||||| |||||||| || | || || ||||| | || | | ||||||||| Sbjct 37397 TCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCT 37456 Query 46502 ATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 ||||||| ||| | ||| | | | |||||| || ||||| || | |||||||| Sbjct 37457 TGGATCTTCGCCTT-AACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGT 37515 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || ||||| ||||| Sbjct 37516 CTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 37548 >seq2162 Length=51060 Score = 114 bits (126), Expect = 1e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||||||| ||||||||| | || || |||||||| || ||||| Sbjct 4687 CTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGCCCATCCTCAAGCTGCTTACCCGCGAA 4746 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||| | || | || ||||||||| |||||| ||||| | Sbjct 4747 GATCAAGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 4806 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | ||||| || || || || | ||||||||||| ||||| || Sbjct 4807 GTCGATGGTGTCTGAGGACTCAACCTCGAGAGTGATGGTTTTACCCGTGAG 4857 >seq454 Length=96760 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || |||||||||||||| || ||||| | || || |||||||| || ||||| Sbjct 80282 CTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAA 80341 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | || |||||| ||| |||||| || | | Sbjct 80342 GATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCCTGAATCTTCGCTTTCACATT 80401 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||||| |||||| || |||| || || || |||||||| || || || || Sbjct 80402 GTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGAC 80461 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 80462 GAAGATCTGCAT 80473 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||| ||||| || ||||| | || || ||||| || || ||||| Sbjct 80510 CTCCTTCTGGATATTGTAATCGGACAGCGTGCGACCATCCTCAAGCTGTTTACCAGCGAA 80569 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| || |||| || | | |||||| ||| |||||| ||| | | Sbjct 80570 GATAAGACGCTGTTGATCGGGTGGGATACCCTCCTTATCCTGAATCTTCGCCTTCACATT 80629 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || |||| || || || |||||||| || || || || Sbjct 80630 GTCGATCGTGTCAGACGACTCGACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGAC 80689 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 80690 GAAGATCTGCAT 80701 Score = 89.7 bits (98), Expect = 6e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 ||||| | || || ||||| ||||||||||| ||||| || || || | || || || Sbjct 79761 AGATGAAGCGTGCTTTCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCTCAAGT 79820 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 |||||||| || || ||||||||||| || || | || | | ||||| || ||| Sbjct 79821 TGCTTGCCAGCAAAGATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTGAATC 79880 Query 46508 TTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCC 46567 || ||| | | | | ||||| ||| || || |||| || ||||| ||||| Sbjct 79881 TTGGCCTTCACATTGTCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCTTGCCA 79940 Query 46568 GTCAGCGTTTTAACAAAGATTTGCATT 46594 || || || || || ||||| |||||| Sbjct 79941 GTAAGAGTCTTCACGAAGATCTGCATT 79967 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || || || |||| || || |||||||| || || Sbjct 80003 CTCCTTCTGGATGTTGTAATCCGAGAGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAA 80062 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | || | || ||||||||| |||||| ||| | | Sbjct 80063 GATGAGTCGTTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTTACATT 80122 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||| || || || || || | |||||| || ||||| || || || || || Sbjct 80123 GTCGATCGTATCAGATGACTCGACTTCAAGCGTGATCGTCTTGCCGGTGAGAGTCTTCAC 80182 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 80183 GAAGATTTGCAT 80194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565217069315880