Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq454 109 2e-18 seq221 89.7 2e-12 >seq454 Length=96760 Score = 109 bits (120), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || || ||||| || || ||||| | || ||||| || || Sbjct 79967 AATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACCATTACATTGGAGGTTGAGTCGTC 79908 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | |||||| | | || || ||||||||||||||||| |||||||| ||||| Sbjct 79907 GGACACCATTGACAATGTGAAGGCCAAGATTCAAGATAAGGAAGGGATTCCTCCAGATCA 79848 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| || || || || | || || |||||||| ||||| | || | | ||||| || Sbjct 79847 ACAGCGCTTGATCTTTGCTGGCAAGCAACTTGAGGATGGTCGGACGCTTTCCGATTACAA 79788 Query 391229 TATTGATAAGGATGCAACACTTCA-CTTAGTA 391259 ||| | ||||| || ||||| ||| ||| Sbjct 79787 TATCCAGAAGGAAAGCACGCTTCATCTTGGTA 79756 Score = 93.3 bits (102), Expect = 2e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || || ||||| || || |||||| Sbjct 80194 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAGACGATCACGCTTGAAGTCGAGTCATCT 80135 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || || ||||| || |||||||| |||||||| || || Sbjct 80134 GATACGATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAG 80075 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || || | || || ||||||||||| || | || | ||||||| || Sbjct 80074 CAACGACTCATCTTTGCTGGCAAGCAACTTGAAGACGGTCGTACACTCTCGGATTACAAC 80015 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 80014 ATCCAGAAGGAGTCCACTCTTCAC 79991 >seq221 Length=41398 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||||| || || || ||||| || || || || Sbjct 37548 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATCACCCTTGAGGTGGAGTCCTCC 37489 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || |||| || || ||||| ||||| ||||||||||| || ||| Sbjct 37488 GACACCATCGACAACGTTAAGGCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAA 37429 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || || || || || ||||| | || | | || ||||| Sbjct 37428 CAACGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACCCTTTCTGACTATAAC 37369 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| || |||||| Sbjct 37368 ATCCAGAAGGAGAGCACTCTTCAC 37345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975641977360052