Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1814 96.9 4e-15 seq769 95.1 1e-14 >seq1814 Length=443622 Score = 96.9 bits (106), Expect = 4e-15 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||||| || ||| ||| || || || |||||| || || Sbjct 436010 GCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCG 435951 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| ||||| || ||||||| ||| | || | ||| ||| || || ||||| ||||| Sbjct 435950 GGCATCAGACCACGTTTCTTCAGCCAGAAGATCGACGC-GAAAGATCCAGAGAAAAAGAT 435892 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA 117452 |||||| || |||||| || | || ||||| | |||||| || | | || ||| Sbjct 435891 ACCCTCGACGGCCGCAAAGGCGACGAGACGCTCAGAGAAGGA-CGCGTTCTCGTCCGAAA 435833 Query 117453 -CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 117511 |||||||| ||||| | |||||| ||| | || || | ||| | |||||| || | Sbjct 435832 TCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCGA 435773 Query 117512 A 117512 | Sbjct 435772 A 435772 >seq769 Length=68272 Score = 95.1 bits (104), Expect = 1e-14 Identities = 270/410 (66%), Gaps = 9/410 (2%) Strand=Plus/Plus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 || || || ||||| || || | || ||| ||| || | ||| ||||||| || | Sbjct 1928 CGGTCGAAACGACCGGGGCGCATCAGAGCGGGATCGAGAACGTCAGCGCGATTGGTGCCA 1987 Query 9252 GCGATGACAACAATACCTGTT--TCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGT 9309 |||| || |||| | || | | | | || ||||||||||| | || |||| Sbjct 1988 GCGAGAACCACAA--CGTGCTCTTGGGTGCCGAAGCCATCCATCTCCACAAGGAGCTGGT 2045 Query 9310 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACC---AGCACTGCGTTGCTTTC 9366 | | ||| | || |||||||| || || || ||||| || ||| ||| | Sbjct 2046 TCAAAGTGTTCTCGCGTTCATCGTTAGCACCGATTCCACCTTTTCGACCGCGAGCCTTGC 2105 Query 9367 CCACGGCATCAATCTCATCAATGAAGACAATACAT-GGTTGATTTTCGCGGGCGATTTCA 9425 | | ||| || || ||||| | ||| ||||| ||| || | | ||| || || | || Sbjct 2106 CGATGGCGTCGATTTCATCGACGAAAACAATGCATGGGGCGTTCTTCTTGGCCG-TCGCA 2164 Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485 ||||| || || || | | || ||||| |||||||| ||||| || | || | || Sbjct 2165 AAGAGGTCCCGTACACGAGACGAACCAACACCGACAAACATTTCCACGAACTCTGAGCCG 2224 Query 9486 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9545 ||| || ||| || || || | ||| || ||| ||||| |||||| | ||| || Sbjct 2225 GAAACCGAGAAGAATGGTACGTTGGCTTCTCCTGCAGTGGCTTTGGCGAGCAAAGTTTTT 2284 Query 9546 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 |||||||| || ||| | |||| || || || || |||||||| || Sbjct 2285 CCCGTACCGGGAGGACCTGAAAGGATTGCGCCTCGAGGGATCTTGGCACC 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589958535599560