Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq751 114 1e-19 seq454 93.3 3e-13 >seq751 Length=158892 Score = 114 bits (126), Expect = 1e-19 Identities = 263/391 (67%), Gaps = 4/391 (1%) Strand=Plus/Plus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || || || ||||||||||||||||||||||| | || || ||||| || |||||| | Sbjct 145836 AACCCCGACGAGGCTGTTGCCTATGGTGCCGCCGTCCAGGCCGCTATCCTCTCTGGAGAC 145895 Query 552270 ACTGATGA-AAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTT 552328 ||| || || ||| || | || | || | |||||| | ||||| || || ||| | Sbjct 145896 ACTTCCGAGAAGACT-CAGGACCTTCTCCTCCTCGATGTTGCCCCTCTGTCCCTCGGTAT 145954 Query 552329 AGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAA 552388 || || | ||| ||| | ||||| || ||| | | || |||||| | || || Sbjct 145955 CGAGACTGCTGGTGGTGTCATGACCGCACTCATCAAGCGTAACACTACTGTCCCAACCAA 146014 Query 552389 AAAATCTCGTG-TATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447 || || || | | || || || || || || || || ||| ||| || || ||| Sbjct 146015 GAAGTC-CGAGATCTTCTCGACTTACTCCGACAACCAGCCTGGTGTGCTTATCCAGGTTT 146073 Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507 ||| || ||| | ||| ||||| || |||| || || | || | | | Sbjct 146074 ATGAGGGTGAACGTGCTCGCACCAAAGACAACAATCTCCTCGGCAAGTTCGAGCTGTCCG 146133 Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCA 552567 | |||||||| || |||||||| || || || ||||| || || || || ||||| |||| Sbjct 146134 GCATTCCTCCCGCGCCTCGTGGTGTTCCTCAGATTGAGGTCACGTTTGACATCGACGCCA 146193 Query 552568 ATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 | || ||| | ||||| |||| | ||| || Sbjct 146194 ACGGTATTCTCAATGTCTCTGCGTCTGACAA 146224 >seq454 Length=96760 Score = 93.3 bits (102), Expect = 3e-13 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| || || || ||||| || ||| | ||| || |||||||| | || || | Sbjct 79977 AGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGG--ATGTTGTAATCCGAGAGTGTAC 80034 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||||||||||| || || ||||| || |||| |||||| || |||||||| |||| Sbjct 80035 GACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGAATGCCTT 80094 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 | || || ||||| || ||||| || || ||||||| ||| | | ||| || Sbjct 80095 CCTTGTCCTGAATCTTCGCCTTTACATTGTCGATCGTATCAG-ATGACTCGACTTCAAGC 80153 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || || || ||||| || ||||| |||||||| Sbjct 80154 GTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029136341664310