Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq850 84.2 2e-11 >seq850 Length=41038 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCT-GCCCTCATGTCCGTGTACTCTGCTCCGAA 30173 |||||||| || || ||||| ||||||| | | || || | ||| | ||| || || Sbjct 12969 AGCTGATCTACACCTTCCCCCGTGTAGTCTTGGTCACA-GTTCTCGTATTTTGCCCCAAA 13027 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 |||||||| || || ||||| || || |||| || ||||| || || | || || Sbjct 13028 GTGCCTCCATTGAAATCCGTAGACTGGACCCAAATCACCCTCGCGCCGATGTCCCAATCC 13087 Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30293 | ||| |||||||| | | || || ||| | |||||||||||||| || || | || Sbjct 13088 ACGCTTCTCCAAAAACTGCTTCGACCCATTGCCATCCCAGATCTTTACTCCTTTTTGAGA 13147 Query 30294 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341 ||| |||||| ||| | || || ||||| || || ||||| Sbjct 13148 TAGCAGCGTGGAGTCTGTCGCTCCGTGCACAAACCAAAGGAGTTCCTC 13195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408602565298487