Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq221 118 8e-22 seq454 100 2e-16 >seq221 Length=41398 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||||||||| || | ||| |||| ||||||||| Sbjct 37068 TGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCGTCCTCCAACTGC 37127 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || ||||| || ||||| ||||| || |||| |||| ||||||||||| |||||| Sbjct 37128 TTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTG 37187 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | | || || | ||||||||| | || || || || || ||| Sbjct 37188 GCCTTGACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATGGTCTTGCCGGTC 37247 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || || || |||||||| Sbjct 37248 AAGGTCTTGACGAAGATCTGCAT 37270 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 48553 GCAACA--CCAAA-TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGAT 48609 |||||| |||| || || || ||||| || || || |||||||| || ||| | || Sbjct 37895 GCAACATACCAAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGC 37954 Query 48610 CGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCT 48669 | || || | ||||| || || || |||| |||||||| || | |||| ||||||| Sbjct 37955 CATCCTCGAGTTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCT 38014 Query 48670 TGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAA 48729 |||| |||||| || ||| | | | || || | ||| ||||| | || | Sbjct 38015 TGTCTTGAATCTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGA 38074 Query 48730 TCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || || || ||||| || || ||||| |||||||| Sbjct 38075 TGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 38111 >seq454 Length=96760 Score = 100 bits (110), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 48558 ACCAA-ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||| ||| |||||||| || || || ||||||||||| || || | ||| | || || Sbjct 79757 ACCAAGATGAAGCGTGCTTTCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCTC 79816 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 | ||||| || ||||| |||| ||||||||||| | |||| || ||||| || Sbjct 79817 AAGTTGCTTGCCAGCAAAGATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTG 79876 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| || ||| | | | || |||| ||| ||||||| ||||| || || Sbjct 79877 AATCTTGGCCTTCACATTGTCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCTT 79936 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||| || || || |||||||| Sbjct 79937 GCCAGTAAGAGTCTTCACGAAGATCTGCAT 79966 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||||||||| || || || | ||| | || || | ||||||||| || || Sbjct 80282 CTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAA 80341 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || ||||| ||||| | |||| ||||||||| || |||||| ||| ||| Sbjct 80342 GATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCCTGAATCTTCGCTTTCACATT 80401 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || |||| || ||||||| |||||||| || ||||| | || || || Sbjct 80402 GTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGAC 80461 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 80462 GAAGATCTGCAT 80473 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || || | || | ||| || ||| ||| || || ||||||||||| || Sbjct 80474 GCCGCCACGAAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGA 80533 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | ||| | || || | ||| ||||| || || || || ||||||||||| | || Sbjct 80534 CAGCGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATAAGACGCTGTTGATCGGGTGG 80593 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||| || |||||| || ||| | | | || |||| ||| || Sbjct 80594 GATACCCTCCTTATCCTGAATCTTCGCCTTCACATTGTCGATCGTGTCAGACGACTCGAC 80653 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| |||||||| || ||||| | || || || || |||||||| Sbjct 80654 CTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 80701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380923583758137