Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1814 159 6e-34 >seq1814 Length=443622 Score = 159 bits (176), Expect = 6e-34 Identities = 384/571 (67%), Gaps = 19/571 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAAC-TCAAACTGGACCGCCGAAGAGATTGATCT 25535 || ||| | |||||||||||| | | || | || |||||| ||||| ||||| || || Sbjct 435457 ATCTGGCAAATGTACAAGAAG-CACGAAGCGTCGTTCTGGACGGCCGAGGAGATGGACCT 435515 Query 25536 GGCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | | |||||| | ||| |||| || || || | | | |||| || || || Sbjct 435516 GTCAAAGGACCTTCACGACTGGAACAACCGCCTTAATGATA-ATGAGCGTCACTTCGTCT 435574 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | | || |||| |||||||| || ||||| ||||| || |||||||| || || Sbjct 435575 CGCATGTTCTGGCCTTCTTTGCTGCGTCTGACGGTATCGTTAACGAGAACTTGCTTGAAC 435634 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 ||||| || ||||| || | | ||||| || ||||| || ||||| || | Sbjct 435635 GATTCTCCTCTGAAGTCCAATGTGCCGAGGCGCGGTCGTTCTATGGCTTCCAAATCATGA 435694 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA-- 25766 | || || | ||||| ||| || || || || || |||||||| | || Sbjct 435695 TGGAGAACATCCACTCCGAGACATACTCC---CTCCTCATCGACACGTACATCAAGGAAC 435751 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 || || | | || | || || | |||||||||| || || || |||||||||| Sbjct 435752 CGAAGCAGCGTGAATAC--CTCTTCGATGCCATCGAGACTATCCCTTGCGTCAAGAGGAA 435809 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 ||| ||||| |||| ||||| | ||| ||| | || ||||| || || Sbjct 435810 GGCTGATTGGGCGCTGAAATGGATTTCGGACGAGAACGCGTCCTTCTCTGAGCGTCTCGT 435869 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 |||||||| || || ||||| ||||||||| || || || ||| | ||||||||||| Sbjct 435870 CGCCTTTGCGGCCGTCGAGGGTATCTTTTTCTCTGGATCTTTCGCGTCGATCTTCTGGCT 435929 Query 25947 CAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||| | | | || | |||||||| || ||| || ||||||||||| ||| | |||| Sbjct 435930 GAAG-AAACGTGGTCTGATGCCCGGTCTCACCTTCTCGAACGAGCTCATTAGCCGCGACG 435988 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 |||| | |||| || ||||| ||||| || Sbjct 435989 AGGGCATGCACACCGACTTTGCTTGCCTCCT 436019 Score = 89.7 bits (98), Expect = 1e-12 Identities = 172/251 (69%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 25787 TGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 ||||| ||| ||||| ||| || || |||||| | ||| || ||||| || | Sbjct 433947 TGTTTACTGCTATCGA-CACGATTCCGGCCATCAAAAAGAAAGCAGACTGGGCACTGCGG 433889 Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 ||||| | |||| | ||||| |||||||| |||| || || || || || || Sbjct 433888 TGGATTTCGGACGAGAGGTCATCGTTTAGCGAGCGGTTGGTGGCGTTCGCGGCAGTCGAA 433829 Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965 ||||| || ||| || | |||||| | || || ||||||||| || ||| |||| Sbjct 433828 GGCATATTCTTCTCTGGGTGTTTTGCGTCAATATTTTGGCTCAAGAAGCGCGGGCTCATG 433769 Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTT 26025 || || | ||| ||||||||||||||||| | || || || | |||| || ||| Sbjct 433768 CCTGGTTTAACCTTCTCCAACGAGCTCATCAGTCGTGATGAAGGCATGCACACCGACTTT 433709 Query 26026 GCCTGCCTGCT 26036 || || |||| Sbjct 433708 GCGTGTATGCT 433698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928809747719360