Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq454 120 2e-21 seq221 102 5e-16 >seq454 Length=96760 Score = 120 bits (132), Expect = 2e-21 Identities = 120/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 |||||||||||||| |||||||| || || ||||| || || |||||||| ||||||||| Sbjct 80040 TCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGAATGCCTTCCTTG 80099 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 || |||||||| || ||| || || ||||||| || | | |||||| || || Sbjct 80100 TCCTGAATCTTCGCCTTTACATTGTCGATCGTATCAGATGACTCGA-CTTCAAGCGTGAT 80158 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||||||||| ||||| ||||| Sbjct 80159 CGTCTTGCCGGTGAGAGTCTTCACGAAGATTTG 80191 Score = 107 bits (118), Expect = 1e-17 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||||||||| || ||||| || | ||| ||||| | || || | ||| |||| Sbjct 79759 CAAGATGAAGCGTGCTTTCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCTCAA 79818 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||||||| |||||||| || | || |||||||| |||||||| |||||||| ||||||| Sbjct 79819 GTTGCTTGCCAGCAAAGATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTGAA 79878 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 |||| || ||| ||||| || || | | | || | ||| ||||| || || Sbjct 79879 TCTTGGCCTTCACATTGTCAATGGTGTCCGACGACTCAACCTCCAA-TGTAATGGTCTTG 79937 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||| ||||| || || Sbjct 79938 CCAGTAAGAGTCTTCACGAAGATCTG 79963 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| ||||||||||| || || || | ||| ||||| | || || Sbjct 80480 ACGAAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGACAGCGT 80539 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| || || ||||| || |||||||| |||||||| || || || || Sbjct 80540 GCGACCATCCTCAAGCTGTTTACCAGCGAAGATAAGACGCTGTTGATCGGGTGGGATACC 80599 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| || |||||||| || ||| || || || |||| | | | | ||| Sbjct 80600 CTCCTTATCCTGAATCTTCGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCCAA 80659 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || ||||| ||||| ||||| || || Sbjct 80660 -TGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 80698 >seq221 Length=41398 Score = 102 bits (112), Expect = 5e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| |||| || || | ||| || || |||||||| || || || ||||||||| Sbjct 37648 TTATAGTCAGAGAGTGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGT 37707 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || ||||| || || ||||||||||| |||||| |||||| || || || ||| Sbjct 37708 TGGTCTGGAGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTGTCGATGGTGTCA 37767 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | |||||||| ||||| || || ||||| ||||| |||||||| || Sbjct 37768 GAGGACTCGACCTCAAGGGTGATAGTCTTGCCCGTGAGCGTCTTGACGAAAATCTG 37823 Score = 91.5 bits (100), Expect = 1e-12 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| || || ||||| || || | || ||||| | ||||| | | ||| || | Sbjct 37904 CAAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGA 37963 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||||||| ||||| || || | ||| ||||| || |||||||| || ||||||||||||| Sbjct 37964 GTTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAA 38023 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 |||| |||||| || || || |||| | |||||||| || || || | Sbjct 38024 TCTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGC 38083 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 |||| | ||||| || || || || Sbjct 38084 CGGTCAAGGTCTTCACAAAGATCTG 38108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268049700441812