Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq769 114 2e-20 seq1814 96.9 4e-15 seq616 96.9 4e-15 >seq769 Length=68272 Score = 114 bits (126), Expect = 2e-20 Identities = 278/413 (67%), Gaps = 15/413 (4%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 |||||||||||||| |||||||| | || | ||| || ||||||||||| || | Sbjct 2334 GGTGCCAAGATCCCTCGAGGCGCAATCCTTTCAGGTCCTCCCGGTACGGGAAAAACTTTG 2275 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 |||||| ||||| || || ||| | || || |||||| || | || | | || | Sbjct 2274 CTCGCCAAAGCCACTGCAGGAGAAGCCAACGTACCATTCTTCTCGGTTTCCGGCTCAGAG 2215 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 || ||||| |||||||| ||||| ||| | | || || || ||||||| | || | Sbjct 2214 TTCGTGGAAATGTTTGTCGGTGTTGGTTCGTCTCGTGTACGGGACCTCTTTGCGA-CGGC 2156 Query 175456 CGCGAA-AATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACG 175514 | ||| || ||||| ||||| ||| | ||||| || || || | |||||| || Sbjct 2155 CAAGAAGAACGCCCCATGCATTGTTTTCGTCGATGAAATCGACGCCATCGGCAAGGCTCG 2096 Query 175515 CAG-CG--CTGGTGGTATGCCAGCAAATGACGA--GAGAGAACAAACAATTAATCAACTA 175569 | | || ||||| || || || || || | |||||| || | || || || Sbjct 2095 CGGTCGAAAAGGTGGAATCGGTGCTAACGATGAACGCGAGAAC--ACTTTGAACCAGCTC 2038 Query 175570 CTCACCGAGATGGATGGCTTTGACA---ATGAGACTGGCATTGTGGTTATTGCGGCCACT 175626 || |||||||||||||| | || | ||| | |||||||| | || | ||| Sbjct 2037 CTTGTGGAGATGGATGGCTTCGGCACCCAAGAG---CACGTTGTGGTTCTCGCTGGCACC 1981 Query 175627 AATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 ||||||| || | || ||| ||| || | ||||| |||||||| || || Sbjct 1980 AATCGCGCTGACGTTCTCGATCCCGCTCTGATGCGCCCCGGTCGTTTCGACCG 1928 >seq1814 Length=443622 Score = 96.9 bits (106), Expect = 4e-15 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || || |||||| | ||| | || || | ||| |||||| | ||||| |||||||| Sbjct 435772 TTCGATGCCATCGAGACTATCCCTTGCGTCAAGAGGAAGGCTGATTGGGCGCTGAAATGG 435831 Query 65050 -TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGG 65108 ||| || | | || |||||| | ||||| || | || |||||| || ||||| Sbjct 435832 ATTTCGGACGAGAACGCG-TCCTTCTCTGAGCGTCTCGTCGCCTTTGCGGCCGTCGAGGG 435890 Query 65109 TATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGC 65167 |||||| ||||| || || ||| ||| | || | ||| ||||||| || ||||| |||| Sbjct 435891 TATCTTTTTCTCTGGATCTTTC-GCGTCGATCTTCTGGCTGAAGAAACGTGGTCTGATGC 435949 Query 65168 CAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTG 65227 | || || |||||| || || || ||| ||| || ||||| | ||| || |||| Sbjct 435950 CCGGTCTCACCTTCTCGAACGAGCTCATTAGCCGCGACGAGGGCATGCACACCGACTTTG 436009 Query 65228 C 65228 | Sbjct 436010 C 436010 >seq616 Length=116746 Score = 96.9 bits (106), Expect = 4e-15 Identities = 269/407 (66%), Gaps = 22/407 (5%) Strand=Plus/Minus Query 76193 TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT- 76251 ||||||||||| || | ||||||||| | ||||| || || || || |||| || || Sbjct 86109 TCTAATATGCGTCATCGCCCTATTGGTGTCGGTGTACAGGGCCTTGCAGATGCGTTCATG 86050 Query 76252 --TTTG----TGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTAT 76305 |||| ||||| ||||| || | ||||| | | | ||| | || Sbjct 86049 GCTTTGAAAATGCCG-------TTTGAATCCGCAGAAGCGAGAATGCTCAATAAGCAGAT 85997 Query 76306 CTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGG 76365 ||| || || || || ||||| | ||||||| || | || | ||| ||| | || Sbjct 85996 CTTCGAGACGATCTACCACGCTGCATTGGAGGCCAGCAGCGAGATCGCTCAAGTGGATGG 85937 Query 76366 TTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTG 76425 | | |||||||| | |||||| || || ||| | || ||| ||||| ||| | || Sbjct 85936 TCCATATGAGACGTGGGAGGGTAGCCCGGCATCCAAGGGACAGCTCCAGTTCGATCTCTG 85877 Query 76426 GGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGGAACGCAT--CAAGG 76481 || | ||| ||||| | || || |||||| | | | |||||| || | ||| Sbjct 85876 GGGCG-TGACACCAACGGATCT-CTGGGACTGGACTAGTTTGAAGGAAAAGATTGCCAGG 85819 Query 76482 AGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA 76541 | | ||||| | ||| ||| | | || || ||||| || || || ||| |||| Sbjct 85818 ACA--GGTCTGAGGAACTCCCTTCTCCTCGCTCCCATGCCTACGGCGTCTACCAGTCAAA 85761 Query 76542 TCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 |||||||| ||||||||||| || || ||||| | ||||||||| Sbjct 85760 TCTTGGGTTTCAATGAATGCTTCGAGCCCTACACCAGCAACATCTAC 85714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596547086954720