Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1217 104 7e-17 >seq1217 Length=91428 Score = 104 bits (114), Expect = 7e-17 Identities = 181/256 (71%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 ||| |||||||||||||| || || || || || || || || |||| ||| | || Sbjct 11875 ACGCCGCTGAATATAACCTGTCTCAGCGGTCTTGACGGCAGTGTCGATTAAACCTTCGCG 11934 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTC 302711 ||| ||||||| |||||||| | ||||| || || || | | | | || |||| Sbjct 11935 ACCGGCCATAGCGTGGAAGAAGAACTCTTGAGGGGTCAGGCCACGGAGATATGAATTCTC 11994 Query 302712 AACGAAACCACGCGCCTC-GGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT 302770 ||||||||||||| ||| |||| || |||| ||| || ||||| |||||||| | | Sbjct 11995 CACGAAACCACGCGACTCAGGGCTAA-AGTCGTCCTTTGTGAAGTGAGGCAGGGTTC-GA 12052 Query 302771 TCTC-ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAAT- 302828 | || | | ||| | |||||||| || ||||| | ||||| |||| ||| | | Sbjct 12053 TGTCGAAATCCGAAGGGGATACGGCGACCTTCAACAATTTGCTGGCCCA--CACAGACTG 12110 Query 302829 -CATCTGCGAAATATT 302843 ||||||||| || || Sbjct 12111 ACATCTGCGAGATGTT 12126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471760668715403