Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1814 127 2e-23 >seq1814 Length=443622 Score = 127 bits (140), Expect = 2e-23 Identities = 202/285 (71%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| || || | ||||| |||| ||| |||||||| || || || ||| Sbjct 435992 CCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGACCACGTTTC 435933 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 || ||||| ||||| | ||| |||| || ||||||||||| ||||||||||| ||||| Sbjct 435932 TTCAGCCAGAAGATCGACGC-GAAAGATCCAGAGAAAAAGATACCCTCGACGGCCGCAAA 435874 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | ||| ||| ||||| | ||| | || | ||| | ||||| |||| |||||| Sbjct 435873 GGCGACGAGACGCTCAGAGAAG--GACG-CGTTCTCGTCCGAAATCCATTTCAGCGCCCA 435817 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 || ||||| || | || | || | || |||||||| ||||||| || | Sbjct 435816 ATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCGAAGAGGTATTCACGCTG 435757 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||| ||||||| || |||||||| ||||| || || ||||| Sbjct 435756 CTTCGGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTC 435712 Score = 109 bits (120), Expect = 7e-18 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 868717 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGG 868776 ||| || ||||||||||| |||| || ||||||| ||||| | || || |||| Sbjct 433382 CTCAAAGAAGTTGGTCTTCCCCTGAAGGGAGATCATGTCCATAAAGTCAAAGGGATTGGT 433441 Query 868777 CGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGAT 868836 | |||||| ||||| | ||||| || ||||||| ||||| || |||||||| || Sbjct 433442 GGACTTGTAATGCTTGGGGTTGCCGAGAGATTCGAGCAGACGGTCTGCAACAAACTCAAT 433501 Query 868837 GTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCG 868886 |||||| | |||||| | || ||||||||||| || |||||| || || Sbjct 433502 GTACTGACTCATGAGTGCTGCATTCATGCCGATAAGGTCCACCGACAACG 433551 Score = 105 bits (116), Expect = 8e-17 Identities = 199/288 (69%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 ||||| || |||||||| | |||||| |||| | || |||||||| ||||||||| Sbjct 433725 CCTTCATCACGACTGATGAGCTCGTTGGAGAAGGTTAAACCAGGCATGAGCCCGCGCTTC 433784 Query 869240 TTGAGCCAAAAGA-TGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||||| | || |||| |||| || ||||| || ||||| ||||| || || || Sbjct 433785 TTGAGCCAAAATATTGACGCA-AAACACCCAGAGAAGAATATGCCTTCGACTGCCGCGAA 433843 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | | ||||||| ||| ||| | ||| || || |||||| || || Sbjct 433844 CGCCACCAACCGCTCGCTAAA-----CGATGACCT-CTCGTCCGAAATCCACCGCAGTGC 433897 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 |||||| || || || | | | ||| | ||||||||| || ||| | || ||| Sbjct 433898 CCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATAGCAGTAAACAAGTACTCCCG 433957 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | | | ||| |||| |||||||| ||||| | ||| || || || Sbjct 433958 CTGGTGAGAGTCTTTGATGTAGGTGTCAATCAGTAACGAGTACGTTTC 434005 Score = 100 bits (110), Expect = 3e-15 Identities = 136/185 (74%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| ||| || || ||| |||||| |||||||||||||||| |||||||||| Sbjct 436361 GCCTTGGAGTAGTCCGAGACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATC 436302 Query 868751 AACTCCATCCACGGGAACGGGTTG--GGCGTCTTGTAGTGCTT-TTCGCATCCGAGCGAC 868807 | ||||| | || |||||| | |||| ||| ||| | ||| || || | Sbjct 436301 ATGTCCATGAAGTCAAAGGGGTTGGTGACGTC--GTACACCTTGGTTGCA-CCAAGAGCA 436245 Query 868808 GCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCG 868867 | |||| ||||| ||||| ||||| ||||| ||||||||||| ||| ||||||||| Sbjct 436244 ACAAGCAAACGGTCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCATTCATGCCG 436185 Query 868868 ATGAG 868872 || || Sbjct 436184 ATAAG 436180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106891446722023