Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1814 170 3e-36 >seq1814 Length=443622 Score = 170 bits (188), Expect = 3e-36 Identities = 232/323 (72%), Gaps = 3/323 (1%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| || || | ||||| ||| ||| |||||||| || || || ||| Sbjct 435992 CCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGACCACGTTTC 435933 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||| | |||| || ||||||||||| ||||||||||| |||||| Sbjct 435932 TTCAGCCAGAAGATCGACGCGAAAGATCCAGAGAAAAAGATACCCTCGACGGCCGCAAAG 435873 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||||||| ||||| | || | | | ||| | ||||| |||| |||||| Sbjct 435872 GCGACGAGACGCTCAGAGAAGGACGC---GTTCTCGTCCGAAATCCATTTCAGCGCCCAA 435816 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| || | || | || | || |||||||| ||||||| || || Sbjct 435815 TCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCGAAGAGGTATTCACGCTGC 435756 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 ||| ||||||| ||| |||||||||||||| ||||| ||||| ||||||||||| || Sbjct 435755 TTCGGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCC 435696 Query 794641 ATGGCGATCTGGAAGCCATAAAA 794663 || ||| ||||||||||| || Sbjct 435695 ATCATGATTTGGAAGCCATAGAA 435673 Score = 129 bits (142), Expect = 9e-24 Identities = 228/328 (70%), Gaps = 7/328 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || |||||||| | |||||| ||| | || |||||||| ||||||||| Sbjct 433725 CCTTCATCACGACTGATGAGCTCGTTGGAGAAGGTTAAACCAGGCATGAGCCCGCGCTTC 433784 Query 794401 TTGAGCCAAAAGA-TGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||||| | || | || |||| || ||||| || ||||| ||||| || || || Sbjct 433785 TTGAGCCAAAATATTGACGCA-AAACACCCAGAGAAGAATATGCCTTCGACTGCCGCGAA 433843 Query 794460 GCCGACGAGCCGCTCGGCAAAAG-TGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 | || | ||||||| ||| | || | | ||| | |||||| || |||| Sbjct 433844 CGCCACCAACCGCTCGCTAAACGATGAC----CTCTCGTCCGAAATCCACCGCAGTGCCC 433899 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 | ||||| || || | | | || | ||||||||| || ||| | || ||| || Sbjct 433900 AGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATAGCAGTAAACAAGTACTCCCGCT 433959 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | | ||| |||| ||||||||| || || | |||||| || || ||||| ||||| | Sbjct 433960 GGTGAGAGTCTTTGATGTAGGTGTCAATCAGTAACGAGTACGTTTCGGAGTGTATGTTCT 434019 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || || |||||||| ||||| || Sbjct 434020 CCATCATGACTTGGAAGCCGTAAAAACA 434047 Score = 111 bits (122), Expect = 2e-18 Identities = 143/192 (74%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || ||||||| || || || ||| |||||| |||||||||||||||| |||| Sbjct 436367 ACACCTGCCTTGGAGTAGTCCGAGACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGC 436308 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTC-TCGCACCC- 794008 ||||||| ||||| | || ||||||| |||| ||| ||| | ||||| Sbjct 436307 GAGATCATGTCCATGAAGTCAAAGGGGTTGGTGACGTC--GTACACCTTGGTTGCACCAA 436250 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||| || ||||| ||||| |||||||| |||||||| ||||||||||| ||| || Sbjct 436249 GAGCAAC--AAGCAAACGGTCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCATT 436192 Query 794069 CATGCCGATGAG 794080 ||||||||| || Sbjct 436191 CATGCCGATAAG 436180 Score = 93.3 bits (102), Expect = 7e-13 Identities = 155/221 (70%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 796140 AAAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGC 796199 |||||| | || |||| || |||||||| || ||| || || | ||||| ||| Sbjct 434042 AAAACATCGAGCTTCGGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATT 434101 Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC 796259 || || ||||| ||||||||||||||| || ||||| || ||||| || ||| | Sbjct 434102 TACAATACCGTCTGAGGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCC 434161 Query 796260 GTCGCTGAGCGAGAC---CCAGT-GGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGG 796315 ||| | || | | ||| | || | |||| || ||||| | ||||| || | Sbjct 434162 ATCGTTTAGTTTGTCGTGCCAATCTGAGAG-GTCGTGGCTTAGGTCCATTTCCTCCGCCG 434220 Query 796316 TCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 |||| || || |||||||||||||||||||| | ||| ||| Sbjct 434221 TCCAGAAAGAAGCCTCGGCCTTTTTGTACATTTGCCAGATC 434261 Score = 91.5 bits (100), Expect = 2e-12 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 ||| || ||||||||||| |||| || ||||||| ||||| | || || |||| Sbjct 433382 CTCAAAGAAGTTGGTCTTCCCCTGAAGGGAGATCATGTCCATAAAGTCAAAGGGATTGGT 433441 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044 | | ||| ||||| | ||||| || | ||||| ||||| || || || ||||| Sbjct 433442 GGACTTGTAATGCTTGGGGTTGCCGAGAGATTCGAGCAGACGGTCTGCAACAAACTCAAT 433501 Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCG 794094 |||||| | |||||| || || ||||||||||| || |||| | || || Sbjct 433502 GTACTGACTCATGAGTGCTGCATTCATGCCGATAAGGTCCACCGACAACG 433551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915925255200341