Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq221 118 8e-22 >seq221 Length=41398 Score = 118 bits (130), Expect = 8e-22 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 29596 TCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655 || || || ||||| ||||| | || ||||| ||| |||||||| |||||||| | Sbjct 37921 TCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAAG 37980 Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGT 29714 ||||| | || || || || ||||||||||| |||||||| ||| || | |||||| | Sbjct 37981 ATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTG-AATCTTAGCCTTGACATT 38039 Query 29715 TTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAAC 29774 || | |||||||| || || ||||| || || || ||||| || ||||| || || Sbjct 38040 GTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCAC 38099 Query 29775 AAATATCTGCAT 29786 ||| |||||||| Sbjct 38100 AAAGATCTGCAT 38111 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||| || || || ||||| ||||| | || ||||||| Sbjct 37055 ACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACC 37114 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | || ||||| || | |||| | ||||| ||||| ||||||||||| || Sbjct 37115 GTCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTT 37174 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||||| | || | |||||||| || || ||||| || | Sbjct 37175 GTCCTG-AATCTTGGCCTTGACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGA 37233 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || ||||| || || || |||||||| Sbjct 37234 TGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 37270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385205026220679