Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1217 93.3 3e-13 seq751 93.3 3e-13 >seq1217 Length=91428 Score = 93.3 bits (102), Expect = 3e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| |||||||| | |||||||||||||||| |||||||||||| | ||||| || Sbjct 13709 GGTAAGGAAGGTCGCCTACGAGGAAATTTGATGGGCAAGCGTGTCGATTTCTCTGCTCGG 13650 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCT 432398 || || |||||| |||||| ||| ||| || || | || ||||| ||| Sbjct 13649 ACGGTCATTACTGGTGATCCAAATCTTGAACTTGATCAGGTCGGTGTACCT 13599 >seq751 Length=158892 Score = 93.3 bits (102), Expect = 3e-13 Identities = 256/390 (66%), Gaps = 2/390 (1%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || |||| |||| ||||| |||||||| ||||| || | ||||| ||||| ||||| Sbjct 146224 TTGTCAGACGCAGAGACATTGAGAATACCGTTGGCGTCGATGTCAAACGTGACCTCAATC 146165 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || || | | || || || || || || | || | || || ||| Sbjct 146164 TGAGGAACACCACGAGGCGCGGGAGGAATGCCGGACAGCTCGAACTTGCCGAGGAGATTG 146105 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || ||||| ||| ||||||||||| ||| |||||| || ||| || || Sbjct 146104 TTGTCTTTGGTGCGAGCACGTTCACCCTCATAAACCTGGATAAGCACACCAGGCTGGTTG 146045 Query 281597 TCTGAATAAGTTGTAAATA-CTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 281655 || || ||||| | || | ||| ||| || || || | || ||||| | | || Sbjct 146044 TCGGAGTAAGTCGAGAAGATCTC-GGACTTCTTGGTTGGGACAGTAGTGTTACGCTTGAT 145986 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 | |||||| | ||||||||| || || | ||| || || ||||| | ||||| | Sbjct 145985 GAGTGCGGTCATGACACCACCAGCAGTCTCGATACCGAGGGACAGAGGGGCAACATCGAG 145926 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 281775 |||| || | ||| || || ||| | ||| || ||||| || || | || Sbjct 145925 GAGGAGAAGGTCCTGAGTCTTCTCGGAAGTGTCTCCAGAGAGGATAGCGGCCTGGACGGC 145866 Query 281776 AGCACCATATGCAACAGCTTCATCAGGATT 281805 |||||||| |||||||| || || || || Sbjct 145865 GGCACCATAGGCAACAGCCTCGTCGGGGTT 145836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740482179858294