Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq454 170 4e-37 seq221 125 1e-23 >seq454 Length=96760 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | ||| || || | ||| ||||| || || ||||| || || ||||| || Sbjct 79968 CCTCCTCGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAG 80027 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||||||| ||||| || ||||||||||| |||| ||| || |||||||| Sbjct 80028 AGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGA 80087 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || |||||||| || |||||||| || ||||||||| | || ||| Sbjct 80088 ATGCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATCGTATCAGATGACTCGACT 80147 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || ||||||||||| || | ||||| || || || ||||| Sbjct 80148 TCAAGCGTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 Score = 145 bits (160), Expect = 1e-29 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 82619 TTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 82678 ||| ||||| ||||| ||||| || || | | ||| || || ||||| || |||||||| Sbjct 79775 TTCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCTCAAGTTGCTTGCCAGCAAA 79834 Query 82679 GATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATT 82738 ||| | | |||||||||||||| || |||||||||||||||||||| || || ||||| Sbjct 79835 GATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTGAATCTTGGCCTTCACATT 79894 Query 82739 TTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 ||||| || || | || || ||||| || || |||||||| || | ||||| || Sbjct 79895 GTCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCTTGCCAGTAAGAGTCTTCAC 79954 Query 82799 AAATATCTGCATT 82811 || ||||||||| Sbjct 79955 GAAGATCTGCATT 79967 Score = 143 bits (158), Expect = 5e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| |||||||| || ||||| ||||| || || || || | | ||| || || || || Sbjct 80270 GTGAAGAGTAGACTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGCTG 80329 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || ||||| ||||| || | || |||||||| || || || |||||||| |||||||| Sbjct 80330 CTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCCTGAATCTT 80389 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| ||||| || ||||| || | ||| || ||||| || ||||||||||| || Sbjct 80390 CGCTTTCACATTGTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCCCGT 80449 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 80450 GAGGGTCTTGACGAAGATCTGCAT 80473 Score = 138 bits (152), Expect = 2e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | || || || || || ||||| ||||| ||||| || || | | ||| Sbjct 80486 ACGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGACC 80545 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||| ||||| || | |||||||| || || || || ||||| Sbjct 80546 ATCCTCAAGCTGTTTACCAGCGAAGATAAGACGCTGTTGATCGGGTGGGATACCCTCCTT 80605 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| |||||||| || || ||||| || ||||| ||| | || || ||||| || || Sbjct 80606 ATCCTGAATCTTCGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCCAATGTAAT 80665 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || | ||||| || || |||||||| Sbjct 80666 CGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 80701 >seq221 Length=41398 Score = 125 bits (138), Expect = 1e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| |||||| || ||||| || || ||||| || ||| | | || || || ||||| Sbjct 37908 GTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTG 37967 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || ||||| ||||| | | ||||| || ||||| || || ||||| ||||||||||| Sbjct 37968 CTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATCTT 38027 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || ||||| || || || ||| | || || || | || || |||||||| || Sbjct 38028 AGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 38087 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| ||||| |||||||| Sbjct 38088 CAAGGTCTTCACAAAGATCTGCAT 38111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981789222003441