Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq221 120 3e-22 seq454 113 4e-20 seq2162 104 2e-17 seq616 100 3e-16 seq1814 84.2 2e-11 >seq221 Length=41398 Score = 120 bits (132), Expect = 3e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || ||| | ||||| || || ||||| ||||||||||| |||||| Sbjct 37672 TCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGGATGCCCTCCTTG 37731 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||||| ||||| | || | ||||| | || ||| || || | ||||| Sbjct 37732 TCTTGGATCTTTGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATA 37791 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 || ||||| || || || || ||||||||||||||| || Sbjct 37792 GTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCATGCCT 37830 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || |||||||| | ||| ||| |||||| | ||||||||| ||| Sbjct 37079 CTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACC-GTCCTCCAACTGCTTGCCGGCGA 37137 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || ||||||||||| ||||| || || |||||||| ||||| ||||| | Sbjct 37138 AGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGT 37197 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| ||||| | || |||||| || | |||| ||| |||||||||| || || | Sbjct 37198 TATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGA 37257 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 37258 CGAAGATCTGCAT 37270 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||||||| | ||| | | | |||||||| |||||||| ||| Sbjct 37920 CTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCA-TCCTCGAGTTGCTTGCCAGCGA 37978 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || | ||||| ||||||||||| || || |||||||| ||||| ||||| | Sbjct 37979 AGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATCTTAGCCTTGACAT 38038 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||| | || ||| || || | ||||| ||| |||||||||| || || | Sbjct 38039 TGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCA 38098 Query 133648 CGAAAATCTGCAT 133660 | || |||||||| Sbjct 38099 CAAAGATCTGCAT 38111 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || ||| | ||||| || || ||||| ||||| || || |||||| Sbjct 37394 TCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTG 37453 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | ||||||| || |||||| || | ||||| | Sbjct 37454 TCTTGGATCTTCGCCTTAACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATG 37513 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| || || ||||| |||||||| Sbjct 37514 GTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 37548 >seq454 Length=96760 Score = 113 bits (124), Expect = 4e-20 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || |||||||| | | ||| |||| ||| || || ||||||| Sbjct 79998 GTGGACTCCTTCTGGATGTTGTAATC--CGAGAGTGTACGACCGTCTTCAAGTTGCTTGC 80055 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| || |||||||| ||||| |||||||||||||| ||||| || Sbjct 80056 CAGCAAAGATGAGTCGTTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATCTTCGCCT 80115 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||| || | | ||| || || | |||| || |||||||| |||| Sbjct 80116 TTACATTGTCGATCGTATCAGATGACTCGACTTCAAGCGTGATCGTCTTGCCGGTGAGAG 80175 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| || |||||| Sbjct 80176 TCTTCACGAAGATTTGCATG 80195 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| |||||||||||| || |||| ||| | ||||| |||| Sbjct 80498 ATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGACCA-TCCTCAAGCT 80556 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || ||| | || || ||||| || ||||| ||||| || ||||| || |||| Sbjct 80557 GTTTACCAGCGAAGATAAGACGCTGTTGATCGGGTGGGATACCCTCCTTATCCTGAATCT 80616 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | || | |||||| | | ||| || || | || | || ||||| | Sbjct 80617 TCGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCCAATGTAATCGTCTTGCCCG 80676 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || || || ||||| ||||||||| Sbjct 80677 TGAGGGTCTTGACGAAGATCTGCATG 80702 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 || ||||| |||||||||||| | ||| ||| | ||||| || |||||||| || | Sbjct 79776 TCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCA-TCCTCAAGTTGCTTGCCAGCAAA 79834 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 || | ||||| || || ||||| || |||||||| || ||||| ||| | | Sbjct 79835 GATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTGAATCTTGGCCTTCACATT 79894 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| ||||| | | ||| || || | || | ||| ||||| || ||||| || || Sbjct 79895 GTCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCTTGCCAGTAAGAGTCTTCAC 79954 Query 133649 GAAAATCTGCAT 133660 ||| |||||||| Sbjct 79955 GAAGATCTGCAT 79966 >seq2162 Length=51060 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||| || || || ||||| |||| | ||| | ||||| ||| Sbjct 4673 AAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGCCCATCCTCAAGC 4732 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| |||||| | || | ||||||||||| || || |||||||||||||| |||| Sbjct 4733 TGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATC 4792 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||| | || ||| || |||| |||| |||||| || Sbjct 4793 TTGGCCTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCGAGAGTGATGGTTTTACCC 4852 Query 133635 GTCAG 133639 || || Sbjct 4853 GTGAG 4857 >seq616 Length=116746 Score = 100 bits (110), Expect = 3e-16 Identities = 403/631 (64%), Gaps = 8/631 (1%) Strand=Plus/Plus Query 148055 CTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCT- 148113 ||| |||||| ||||| |||||||| || || || | || | || ||| ||| Sbjct 85471 CTGACTCTGGCAGATGAAGGCGCCACGATCCGCAGCGAGGTCTAGGAC---CTTCTTCTG 85527 Query 148114 --TCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCG 148171 | ||||||||| | |||||||| | ||||| | ||||| || ||| ||||| Sbjct 85528 GCTGATCTCCCAGACGGTCTTGTAGATAGCCTTGACGTCGTCGGGGATACCGATGATGCT 85587 Query 148172 CTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAG 148231 ||| | |||||| || || | |||| || ||||| ||| | || ||||| Sbjct 85588 CTGGATAGAGCCGTTGTTGGCGATAATCATGTTTTTCATTTGGTCGTCCCAGAGCTTGAG 85647 Query 148232 CTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCG 148291 || | || || || || | | || ||||| |||||||||||||| || || Sbjct 85648 GTCCACGAGCTCGCGGAGGAGCCATGGGCAGACGACCTGGAACTCGCCGGCGAGAACACG 85707 Query 148292 CCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGC 148351 || || | |||||| || | || || || | || ||| ||||| || || Sbjct 85708 GCGAGTGTAGATGTTGCTGGTGTAGGGCTCGAAGCATTCATTGAAACCCAAGATTTGACT 85767 Query 148352 GGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT 148411 ||| | ||||| |||||| || | || || ||||| | || ||| | || Sbjct 85768 GGTAGACGCCGTAGGCATGGGAGCGAGGAGAAGGGAGTTCCTCAGACCTGTCCTGGCAAT 85827 Query 148412 TTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTA 148471 || ||||| | | |||||||||||| || ||||||||| ||| | ||| | Sbjct 85828 CTTTTCCTTCAAACTAGTCCAGTCCCAGAGATCCGTTGGTGTCACGCCCCAGAGATCGAA 85887 Query 148472 CTGCAG-AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCG 148530 ||| || | || || | || ||||| ||||| ||| || || || | | | Sbjct 85888 CTGGAGCTGTCCCTTGGAT-GCCGGGCTACCCTCCCACGTCTCATATGGACCATCCACTT 85946 Query 148531 CCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGT 148590 || | |||| ||| ||||| | || ||| ||| ||||||||| || ||| | | Sbjct 85947 GAGCGATCTCGCTGCTGGCCTCCAATGCAGCGTGGTAGATCGTCTCGAAGATCTGCTTAT 86006 Query 148591 TGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAA 148650 |||||| ||| || ||| ||||||| || || ||||| || |||| Sbjct 86007 TGAGCATTCTCGCTTCTGCGGATTCAAACGGCATTTTCAAAGCCATGAACGCATCTGCAA 86066 Query 148651 GGCCCTGTACGCCCACGCCAATGGGCCGGTG 148681 |||||||||| || || ||||| || || || Sbjct 86067 GGCCCTGTACACCGACACCAATAGGGCGATG 86097 >seq1814 Length=443622 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 120364 ACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAAC 120423 || ||||||||||| ||||| || || |||| | || || ||| |||||| || || Sbjct 433374 ACTCGTTTCTCAAAGAAGTTGGTCTTCCCCTGAAGGGAGATCATGTCCATAAAGTCAAAG 433433 Query 120424 GGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACA 120483 || ||| | | || | | || || | ||| | | ||||||| ||||| || ||| Sbjct 433434 GGATTGGTGGACTTGTAATGCTTGGGGTTGCCGAGAGATTCGAGCAGACGGTCTGCAACA 433493 Query 120484 AACTCAATGTACTCGCACATGGACTGC-GCGTTCATGCCCAGCAACGCCACCGGCAACGC 120542 ||||||||||||| | ||| || ||| || |||||||| | | |||||| |||||| Sbjct 433494 AACTCAATGTACTGACTCAT-GAGTGCTGCATTCATGCCGATAAGGTCCACCGACAACGC 433552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483402556907560