Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq221 107 1e-18 seq454 95.1 8e-15 >seq221 Length=41398 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||||||||| || || ||||||||||| || || ||||| |||| ||||| || Sbjct 37068 TGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCGTCCTCCAACTGC 37127 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || |||| |||||||| || | || | ||| || ||||| ||| || Sbjct 37128 TTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTG 37187 Query 33667 TGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTT 33726 || | || | |||||| || ||||| |||| ||||| || || || || Sbjct 37188 GCCTTGACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATGGTCTTGCCGGTC 37247 Query 33727 AACGTTTTTACAAAGATCTGCATA 33750 || || || || |||||||||||| Sbjct 37248 AAGGTCTTGACGAAGATCTGCATA 37271 Score = 105 bits (116), Expect = 4e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||||| || || |||||||||||||| || ||||| | || || | ||| Sbjct 37909 TGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGTTGC 37968 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || ||||||||||| || || | || | ||| || ||||| ||| || Sbjct 37969 TTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAATCTT- 38027 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| ||| | |||||| || || || |||| ||||| || || || || Sbjct 38028 AGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 38087 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 || || || ||||||||||||||| Sbjct 38088 CAAGGTCTTCACAAAGATCTGCATA 38112 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||||||||| || || ||||| || || || || || || | || || | || Sbjct 37346 TGAAGAGTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCCTCGAGCTGC 37405 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | ||| || || ||| | || | || || ||||| || ||| Sbjct 37406 TTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATCTTC 37465 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | ||| | ||| | ||||||| || ||||| |||| ||||| || ||||| || Sbjct 37466 -GCCTTAACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCAGT 37524 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 || || || || |||||||||||| Sbjct 37525 CAAGGTCTTGACGAAGATCTGCATA 37549 >seq454 Length=96760 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || ||||||||||| |||||||| || |||| || | ||| Sbjct 79992 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGTGTACGACCGTCTTCAAGTTGC 80051 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || ||||| || | || ||||| ||| | || | ||||| ||||| ||| ||| Sbjct 80052 TTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATCTTC 80111 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| ||| | || || ||| || || |||| ||||||||| || || || Sbjct 80112 -GCCTTTACATTGTCGATCGTATCAGATGACTCGACTTCAAGCGTGATCGTCTTGCCGGT 80170 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||| ||||| Sbjct 80171 GAGAGTCTTCACGAAGATTTGCAT 80194 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 33541 ACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || ||||| || || || || ||||||||||| || || || | || || Sbjct 79757 ACCAAGATGAAGCGTGCTTTCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCTC 79816 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | ||| || || ||||| ||||| ||||| |||||| | || | ||||| || || Sbjct 79817 AAGTTGCTTGCCAGCAAAGATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTG 79876 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| || ||| |||| ||| | |||||| || || || || | || || || | Sbjct 79877 AATCTTGGCCTTC-ACATTGTCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCT 79935 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || ||||||||||| Sbjct 79936 TGCCAGTAAGAGTCTTCACGAAGATCTGCAT 79966 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || || ||||| ||||| || ||||| | || || | || Sbjct 80271 TGAAGAGTAGACTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGCTGC 80330 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | ||||||||||||| | || | || || || || ||| ||| Sbjct 80331 TTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCCTGAATCTTC 80390 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| |||| ||| | |||||| ||||| || || | || ||||| || || || Sbjct 80391 GCTTTC-ACATTGTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCCCGT 80449 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 80450 GAGGGTCTTGACGAAGATCTGCAT 80473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328691905644480