Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq454 104 6e-17 seq221 93.3 1e-13 >seq454 Length=96760 Score = 104 bits (114), Expect = 6e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || |||||||| | ||||| || ||||| || |||| Sbjct 80179 AAGACTCTCACCGGCAAGACGATCACGCTTGAAGTCGAGTCATCTGATACGATCGACAAT 80120 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||||| || || ||||| ||| || ||| ||| |||| ||||| Sbjct 80119 GTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAGCAACGACTCATCTTT 80060 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | ||||| || | || | | ||||||||| ||||||| ||||| Sbjct 80059 GCTGGCAAGCAACTTGAAGACGGTCGTACACTCTCGGATTACAACATCCAGAAGGAGTCC 80000 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || | | |||||| Sbjct 79999 ACTCTTCACCTCGTCCTTCGTCTTCGA 79973 Score = 104 bits (114), Expect = 6e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || ||||| || ||||| || ||| || ||| Sbjct 80470 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTTGAATCGTCCGAC 80411 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| || |||||| || || || || ||| || || || Sbjct 80410 ACGATCGACAATGTGAAAGCGAA-GATTCAGGATAAGGAGGGCATTCCACCAGATCAGCA 80352 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | ||||||||||| || |||||| | || ||||| | || || |||| ||||| | Sbjct 80351 GCGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTGTCCGACTACAATAT 80292 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| ||||||||||||||||||| Sbjct 80291 TCAGAAGGAGTCTACTCTTCACCTTG 80266 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || ||||| || ||||| || || |||||| Sbjct 80698 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTCGAGTCGTCTGAC 80639 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || || || || Sbjct 80638 ACGATCGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCACCCGATCAACAG 80579 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || || ||| | || ||||| | || || |||||||||| || Sbjct 80578 CGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACGCTGTCCGATTACAATATC 80519 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || ||||| ||||| Sbjct 80518 CAGAAGGAGTCCACCCTTCATCTTGT 80493 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204765 CAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCA 204824 ||||||||||||||||||| ||||| | ||| ||||| | || || | ||||| || | Sbjct 80266 CAAGGTGAAGAGTAGACTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAA 80325 Query 204825 GCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||| || ||||||||||| || || ||| Sbjct 80326 GCTGCTTACCAGCGAAGATAAGACGCTGCTGA 80357 >seq221 Length=41398 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || ||||| | || ||||| |||||| Sbjct 37267 CAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGTCCTCTGAC 37208 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || ||| |||||| || Sbjct 37207 ACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 37148 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| ||||||||||| || || | || | | ||||||||| || Sbjct 37147 CGCCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGTCGCACCCTTTCTGATTACAACATC 37088 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||| |||||||||||||| Sbjct 37087 CAGAAGGAGAGCACTCTTCACCTTGT 37062 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 5/102 (5%) Strand=Plus/Plus Query 204759 TCAAAACA-----AGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCT 204813 |||||||| ||||||||||| ||| ||||||| |||||||||| | || | Sbjct 37330 TCAAAACACACCGAGGTGAAGAGTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACG 37389 Query 204814 TCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| || |||||||||||||||||||| || |||||||| Sbjct 37390 ACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTG 37431 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/216 (69%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || ||||| | || ||||| || ||| Sbjct 37545 CAGATCTTCGTCAAGACCTTGACTGGTAAGACCATCACCCTTGAGGTGGAGTCCTCCGAC 37486 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || |||||| || ||| ||| Sbjct 37485 ACCATCGACAACGTTAAGGCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAACAA 37426 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| | || ||||| | || | | || || ||| || Sbjct 37425 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACCCTTTCTGACTATAACATC 37366 Query 206353 CAGAAAGAGTCTACTCTTCACCT-----TGTTTTGA 206383 ||||| ||| ||||||||||| |||||||| Sbjct 37365 CAGAAGGAGAGCACTCTTCACCTCGGTGTGTTTTGA 37330 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/216 (69%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| |||||||| || || || ||||| | || || || |||||| Sbjct 37823 CAGATTTTCGTCAAGACGCTCACGGGCAAGACTATCACCCTTGAGGTCGAGTCCTCTGAC 37764 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||| ||||| || || || || || ||| ||| Sbjct 37763 ACCATCGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCAGACCAACAA 37704 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| | || ||||| | || | | || || ||| || Sbjct 37703 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACACTCTCTGACTATAACATC 37644 Query 206353 CAGAAAGAGTCTACTCTTCACCT-----TGTTTTGA 206383 ||||| ||| |||| | || || |||||||| Sbjct 37643 CAGAAGGAGAGTACTTTGCATCTCGGTATGTTTTGA 37608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181775086063499