Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1814 205 1e-46 >seq1814 Length=443622 Score = 205 bits (226), Expect = 1e-46 Identities = 383/549 (70%), Gaps = 19/549 (3%) Strand=Plus/Minus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| |||||||| |||||||||||||| || || ||||| || ||||| | | Sbjct 434264 GCAGATCTGGCAAATGTAC-AAAAAGGCCGAGGCTTCTTTCTGGACGGCGGAGGAAATGG 434206 Query 1455832 ACCTCGGCGCCGACACGGTCCACTGGGT--GTCG--CTGAGCGACGACGAGCGCCATTTC 1455887 |||| || |||| | || | || | | || | ||| | ||| ||||| ||| Sbjct 434205 ACCTAAGCCACGAC-CTCTCAGATTGGCACGACAAACTAAACGATGGCGAACGCCACTTC 434147 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || ||||| || |||||||| ||||||| || || || || || ||||| | Sbjct 434146 ATTTCACACGTACTAGCCTTTTT-CGCCGCCTCAGACGGTATTGTAAATGAAAACCTCGT 434088 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || || |||||||| || | || || || | |||||||| ||||| | Sbjct 434087 CGAACGGTTCTCCAATGAGGTCCAGGTGGCCGAAGCTCGATGTTTTTACGGCTTCCAAGT 434028 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||| ||||| ||||| |||||| | ||||| ||||||||| |||| || Sbjct 434027 CATGATGGAGAACATACACTCCGAAACGTACTCGTTACTGATTGACACCTACATCAAAGA 433968 Query 1456068 CCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAA 1456127 | | | || ||| || | ||| || ||||||||| | ||| | | | || || Sbjct 433967 CTCTCACCAGCGGGAGTACTTGTTTACTGCTATCGACACGATTCCGGCCATCAAAAAGAA 433908 Query 1456128 GGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGG 1456184 || |||||||| || |||||| || | |||| | ||| ||| ||||||| Sbjct 433907 AGCAGACTGGGCACTGCGGTGGATTTCGGACGA-GAGGTCATCG----TTTAGCGAGCGG 433853 Query 1456185 CTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTT 1456242 | || | || || || ||||| ||||| || ||||| || |||| |||| | || || Sbjct 433852 TTGGTGGCGTTCGCGGCAGTCGAAGGCATATTCTTCTCTGGGTGTTT-TGCGTCAATATT 433794 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTC 1456302 |||||||||||||||||| |||||||| ||| || ||| |||||| | ||||||| Sbjct 433793 TTGGCTCAAGAAGCGCGGGCTCATGCCTGGT-TTAACCTTCTCCAACGAGCTCATCAGTC 433735 Query 1456303 GCGACGAAG 1456311 | || |||| Sbjct 433734 GTGATGAAG 433726 Score = 174 bits (192), Expect = 2e-37 Identities = 378/549 (69%), Gaps = 29/549 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||| ||| || || || ||||| ||||||||| | |||| Sbjct 435456 GATCTGGCAAATGTAC-AAGAAGCACGAAGCGTCGTTCTGGACGGCCGAGGAGATGGACC 435514 Query 1455835 TCG----GCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| | | || | ||||| || ||| Sbjct 435515 TGTCAAAGGACCTTCACG----ACTGGAACAACCGCCTTAATGATAATGAGCGTCACTTC 435570 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || ||| || || ||||| ||| || || || || ||||| ||||||| || Sbjct 435571 GTCTCGCATGTTCTGGCCTTCTTT-GCTGCGTCTGACGGTATCGTTAACGAGAACTTGCT 435629 Query 1455948 CGGCCGCTT----TATGAAAGAGGTCCAAT-TGCCAGAGGCACGTTTGTTTTACGGGTTC 1456002 | || || | |||| ||||||| |||| ||||| || | ||| || || ||| Sbjct 435630 TGAACGATTCTCCTCTGAA----GTCCAATGTGCC-GAGGCGCGGTCGTTCTATGGCTTC 435684 Query 1456003 CAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTC 1456062 || ||| || || ||||||||||| || || ||||| ||||| |||||||| ||| || Sbjct 435685 CAAATCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACGTACATC 435744 Query 1456063 AAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGG 1456122 ||||| ||| || || ||||||| |||||||| || | || | || | | Sbjct 435745 AAGGAACCGAAGCAGCGTGAATACCTCTTCGATGCCATCGAGACTATCCCTTGCGTCAAG 435804 Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 | ||||| || |||||| |||| ||||| | || | | || | ||| | |||| Sbjct 435805 AGGAAGGCTGATTGGGCGCTGAAATGGATTTCGGACGA-GAACGCGTC-CTTCTCTGAGC 435862 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATC 1456240 | ||||||| |||||| | ||||||||| ||||||||||| || |||| ||| | ||| Sbjct 435863 GTCTCGTCGCCTTTGCGGCCGTCGAGGGTATCTTTTTCTCTGGATCTTTC-GCGTCGATC 435921 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAG 1456300 || ||||| ||||| || || || |||||||||| || ||| ||||| | || || Sbjct 435922 TTCTGGCTGAAGAAACGTGGTCTGATGCCCGGTC-TCACCTTCTCGAACGAGCTCATTAG 435980 Query 1456301 TCGCGACGA 1456309 |||||||| Sbjct 435981 CCGCGACGA 435989 Score = 98.7 bits (108), Expect = 1e-14 Identities = 142/193 (74%), Gaps = 8/193 (4%) Strand=Plus/Plus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||||||||| |||| |||||||||||| |||||||| || ||||| ||||| Sbjct 436180 CTTATCGGCATGAATGCCAA-GCTCATGTGCCAATACATTGAGTTC-GTCGCTGACCGTT 436237 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGC--CAACCCGTTCCCATGGA 1456700 |||| | || || || ||| ||| ||| |||| | |||||| || | | Sbjct 436238 TGCTTGTTGCTCTTGG-TGCAACCAAGGTGTAC--GACGTCACCAACCCCTTTGACTTCA 436294 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACG 1456759 |||| ||||||||||| |||||||||||||||| |||||| || || | || ||| Sbjct 436295 TGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTCTCGGACTACT 436354 Query 1456760 CCAAGGCCGGCGT 1456772 ||||||| || || Sbjct 436355 CCAAGGCAGGTGT 436367 Score = 86.0 bits (94), Expect = 9e-11 Identities = 125/173 (72%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 1456569 CGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTT 1456628 || || |||||| || ||||||||||| || | | |||||| | ||||||||||| ||| Sbjct 433551 CGTTGTCGGTGGACCTTATCGGCATGAATGC-AGCACTCATGAGTCAGTACATTGAGTTT 433493 Query 1456629 TGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACC 1456688 || || ||||| ||||||| | |||||| | ||||| ||| | | |||| | Sbjct 433492 -GTTGCAGACCGTCTGCTCGAATCTCTCGGCAACCCC-AAGCATTACAAGTCCACCAATC 433435 Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 | || | ||||| ||||||| || |||| ||||||||||| || ||| Sbjct 433434 CCTTTGACTTTATGGACATGATCTCCCTTCAGGGGAAGACCAACTTCTTTGAG 433382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177520011901078