Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1814 114 2e-20 >seq1814 Length=443622 Score = 114 bits (126), Expect = 2e-20 Identities = 353/541 (65%), Gaps = 14/541 (3%) Strand=Plus/Plus Query 39637 GCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTT 39696 ||| ||||| | ||| || | ||||| || || || | |||||||| || || ||||| Sbjct 433724 GCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGTTAAACCAGGCATGAGCCCGCGCTT 433783 Query 39697 TTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA 39756 |||||||||||||| | |||||| | ||||| ||||| |||||||| ||||| || || Sbjct 433784 CTTGAGCCAAAATATTGACGCAAAACACCCAGAGAAGAATATGCCTTCGACTGCCGCGAA 433843 Query 39757 TGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCACTTCTGTGCCCAATC 39813 || || | | ||| | | || | || | |||||| | ||||||| || Sbjct 433844 CGCCACCAACCGCTCGCTAAACGATGACCTCTCGTCCGAAATCCACCGCAGTGCCCAGTC 433903 Query 39814 AGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATC 39873 |||||||| || | || || || || |||||| |||| | || | | | Sbjct 433904 TGCTTTCTTTTTGATGGCCGGAATCGTGTCGATAGCAGTAAACAAGTACTCCCGCTGGTG 433963 Query 39874 ACTATCTTTAACATATGTATCTATTAACAGACTA-TACATTTCTGAATGGATGTTTTCAA 39932 | ||||| | || || || || | | || | ||| |||| || || ||||| || | Sbjct 433964 AGAGTCTTTGATGTAGGTGTCAATCAGTA-ACGAGTACGTTTCGGAGTGTATGTTCTCCA 434022 Query 39933 TCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATC 39992 || | || || ||||||||||||| ||||| | | || ||||| | || | Sbjct 434023 TCATGACTTGGAAGCCGTAAAAACATCGAGCTTCGGCCACCTGGACCTCATTGGAGAACC 434082 Query 39993 TTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTT 40052 ||| | | |||||||| || || || || ||||| ||||| || | ||| ||| Sbjct 434083 GTTCGACGAGGTTTTCATTTACAATACCGTCTGAGGCGGCGAAAAAGGCTAGTACGTGTG 434142 Query 40053 TAATAAAAT---ATTTTTCATCGGGTGTCAATTT---ATTCCAGTCATTGATATCTTTTG 40106 ||| || | || ||||| | | ||| | ||| || || || | Sbjct 434143 AAATGAAGTGGCGTTCGCCATCG---TTTAGTTTGTCGTGCCAATCTGAGAGGTCGTGGC 434199 Query 40107 ATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATA 40166 || || | ||| || || ||||| || || ||||| |||||||||||||| | ||| | Sbjct 434200 TTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCTCGGCCTTTTTGTACATTTGCCAGA 434259 Query 40167 T 40167 | Sbjct 434260 T 434260 Score = 114 bits (126), Expect = 2e-20 Identities = 176/249 (71%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| || | |||||| || | ||||| | ||||| || || ||||| Sbjct 436014 GCAAGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAG 435955 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| |||||||| || || ||||| || || | || ||||||||||| || || Sbjct 435954 ACCGGGCATCAGACCACGTTTCTTCAGCCAGAAGATCGACGCGAAAGATCCAGAGAAAAA 435895 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA--ACTTG-TATCATTATG 39792 ||| || || || || ||||| || || || | ||| | | || | | || | Sbjct 435894 GATACCCTCGACGGCCGCAAAGGCGACGAGACGCTCAGAGAAGGACGCGTTCTCGTCCGA 435835 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| ||| | ||||||||||| ||| |||| || ||||| || || || || |||| Sbjct 435834 AATCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATC 435775 Query 39853 AAAGAGATA 39861 ||||| || Sbjct 435774 GAAGAGGTA 435766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686882877779160