Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1814 152 4e-32 >seq1814 Length=443622 Score = 152 bits (168), Expect = 4e-32 Identities = 372/564 (66%), Gaps = 20/564 (4%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || ||||||||||||||||| || |||| || || ||||| || || ||| | || | Sbjct 434260 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCTTTCTGGACGGCGGAGGAAATGGACCTA 434201 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAA-------GAAAAACATTTTAT 43842 | | ||| | || ||||| || | || | || ||| || || || Sbjct 434200 AGCCACGACCTCTCAGATTGG----CACGACAAACTAAACGATGGCGAACGCCACTTCAT 434145 Query 43843 ATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAG 43902 || || | || ||||| || || ||||| || || |||||||| | || Sbjct 434144 TTCACACGTACTAGCCTTTTTCGCCGCCTCAGACGGTATTGTAAATGAAAACCTCGTCGA 434085 Query 43903 TCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962 ||||| | | || || || | | ||||| ||||||||||| || || ||| | Sbjct 434084 ACGGTTCTCCAATGAGGTCCAGGTGGCCGAAGCTCGATGTTTTTACGGCTTCCAAGTCAT 434025 Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG 44022 || || || || || || |||| |||| | ||||| || || ||||||||||| Sbjct 434024 GATGGAGAACATACACTCCGAAACGTACTCGTTACTGATTGACACCTACATCAAAGACTC 433965 Query 44023 GCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGC 44082 ||| || | | ||||||| ||| || || || | || || || ||| | ||||| Sbjct 433964 TCACCAGCGGGAGTACTTGTTTACTGCTATCGACACGATTCCGGCCATCAAAAAGAAAGC 433905 Query 44083 AGACTGGGCCCTTAAATGGATAAATTCAAATGAT------TCTTTTGGAGAACGACTTGT 44136 ||||||||| || ||||| ||| | || || ||| | || || | || Sbjct 433904 AGACTGGGCACTGCGGTGGAT---TTCGGACGAGAGGTCATCGTTTAGCGAGCGGTTGGT 433848 Query 44137 CGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTT 44196 ||||| || | || |||||||| ||||| || || | |||||| | ||||||||| | Sbjct 433847 GGCGTTCGCGGCAGTCGAAGGCATATTCTTCTCTGGGTGTTTTGCGTCAATATTTTGGCT 433788 Query 44197 AAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 ||||| || || | |||||||| || || || || || ||| | || ||||||||||| Sbjct 433787 CAAGAAGCGCGGGCTCATGCCTGGTTTAACCTTCTCCAACGAGCTCATCAGTCGTGATGA 433728 Query 44257 AGGCTTACATTGCGATTTTGCTTG 44280 |||| | || ||| ||||| || Sbjct 433727 AGGCATGCACACCGACTTTGCGTG 433704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397441375979095