Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq769 114 2e-20 seq1294 111 2e-19 seq1814 95.1 2e-14 >seq769 Length=68272 Score = 114 bits (126), Expect = 2e-20 Identities = 277/413 (67%), Gaps = 15/413 (4%) Strand=Plus/Plus Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509 || || |||||||| ||||| | || ||| ||| || | || ||||||| ||| | Sbjct 1928 CGGTCGAAACGACCGGGGCGCATCAGAGCGGGATCGAGAACGTCAGCGCGATTGGTGCCA 1987 Query 11510 GCAATAACCACAATGCCAGTCTCAT---TGTCAAAGCCATCCATCTCGGTGAGTAATTGA 11566 || | |||||||| | ||| | || | |||||||||||||| || | || Sbjct 1988 GCGAGAACCACAACGTG---CTCTTGGGTGCCGAAGCCATCCATCTCCACAAGGAGCTGG 2044 Query 11567 TTAATTGTTTGTTCTCTC--TCATCATTTGCTGGCATACCACCAGC---ACTGCGTTGCT 11621 || | || |||||| | ||||| || || || ||||| || ||| || Sbjct 2045 TTCAAAGT--GTTCTCGCGTTCATCGTTAGCACCGATTCCACCTTTTCGACCGCGAGCCT 2102 Query 11622 TGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGATT 11680 |||| | || || || ||||| | ||| ||||| ||||| || ||| || || | Sbjct 2103 TGCCGATGGCGTCGATTTCATCGACGAAAACAATGCATGGGGCGTTCTTCTTGGCCG-TC 2161 Query 11681 TCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG 11740 ||||||| || || || | | ||| ||||| |||||||| ||||| || | || | Sbjct 2162 GCAAAGAGGTCCCGTACACGAGACGAACCAACACCGACAAACATTTCCACGAACTCTGAG 2221 Query 11741 GCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800 | || | || |||||| || || | ||| || || ||||| |||||| | || Sbjct 2222 CCGGAAACCGAGAAGAATGGTACGTTGGCTTCTCCTGCAGTGGCTTTGGCGAGCAAAGTT 2281 Query 11801 TTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 ||||||||||| || ||| | || | |||||||| |||||||||||||| Sbjct 2282 TTTCCCGTACCGGGAGGACCTGAAAGGATTGCGCCTCGAGGGATCTTGGCACC 2334 >seq1294 Length=32672 Score = 111 bits (122), Expect = 2e-19 Identities = 192/279 (69%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 181625 ACCCGTACCGATACCCTCGGTTCCATTCACGAGAACCATTGGTAAAGTTGGCATGTAAAA 181684 ||| ||||| ||||| || | |||||| || |||||||| ||||| ||||| || | Sbjct 13699 ACCAGTACCAATACCTTCAGCTCCATTGACCAGAACCATGGGTAAGACGGGCATATAGTA 13758 Query 181685 GTCTGGTTCAATGGAGCGTCCATCATCGTCCAAGTAGTTGAGGATCGGGTCATCCCGAGG 181744 | ||||| || ||| ||| ||||| |||| ||| | ||||| || |||||| || Sbjct 13759 CCCAGGTTCGATAGAGTTTCCGTCATCCTCCAGGTAATCGAGGACAGGATCATCCGCTGG 13818 Query 181745 ATCAAAGATCTTGCGAGCCTCCTTGGTAAGTTTTGTGAAGATATACCTCGTTTGAGAAGC 181804 || | ||||| |||||| | | ||| ||||||||||||||| | || | Sbjct 13819 ATGATAGATCGCTCGAGCCATCGGAGACGGTTCTGTGAAGATATACCTGGCGGAAGCATG 13878 Query 181805 GTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTT 181864 ||| || |||||| | ||| ||||| || |||||| ||| || | ||| || || Sbjct 13879 GTCCTTTCCACCCTGGTCACGAGTACCGAACTGACCATTGGGCATCAGTAAGTTGATATT 13938 Query 181865 GTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT 181903 ||| || |||| || | || | ||||||||||| Sbjct 13939 GTTGCTGCCAATATAATCTTGAGCGAGATTAACGATGGT 13977 >seq1814 Length=443622 Score = 95.1 bits (104), Expect = 2e-14 Identities = 170/243 (70%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||||| || ||| ||| || || || |||||| ||||| Sbjct 436010 GCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCG 435951 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| ||||| || ||||||| ||| | || | ||| ||| || || ||||| ||||| Sbjct 435950 GGCATCAGACCACGTTTCTTCAGCCAGAAGATCGACGC-GAAAGATCCAGAGAAAAAGAT 435892 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC--- 122834 |||||| || |||||| || | || || || | |||||| || | || | || Sbjct 435891 ACCCTCGACGGCCGCAAAGGCGACGAGACGCTCAGAGAAGGA-CGCG--TTCTCGTCCGA 435835 Query 122835 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 122894 || |||||||| ||||| | |||||| ||| | || || | ||| | |||||| || Sbjct 435834 AATCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATC 435775 Query 122895 AAA 122897 || Sbjct 435774 GAA 435772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628008299642400