Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1814 156 5e-33 seq769 104 3e-17 >seq1814 Length=443622 Score = 156 bits (172), Expect = 5e-33 Identities = 360/525 (69%), Gaps = 17/525 (3%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||||| ||| ||||| || ||||||||| ||||| Sbjct 436010 GCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCG 435951 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| ||||| || ||||||| |||||| |||| | | ||| || |||||||| ||||| Sbjct 435950 GGCATCAGACCACGTTTCTTCAGCCAGAAGATCGACGCGAAA-GATCCAGAGAAAAAGAT 435892 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA 130194 ||||| || ||| || || | ||||||||||| ||||| || | | || ||| Sbjct 435891 ACCCTCGACGGCCGCAAAGGCGACGAGACGCTCAGAGAAGGA-CGCGTTCTCGTCCGAAA 435833 Query 130195 -CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 ||| |||| |||||| | ||||| ||| || || |||| |||| ||| || || | Sbjct 435832 TCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCGA 435773 Query 130254 AGAGTTCCTTCTTTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 130311 |||| | ||| ||| | || || ||||||||| | || ||||| || ||||| Sbjct 435772 AGAGGT-ATTC-ACGCTGCTTCGGTTCCTTGATGTACGTGTCGATGAGGAGGGAGTATGT 435715 Query 130312 TTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC-GCTT 130369 ||| |||| | | ||| || | || | | ||||| || ||||| || || Sbjct 435714 CTCGGAGTGGATGTTCTCCATCAT-GATTTGGAAGCCATAGAACGACCGCGCCTCGGCAC 435656 Query 130370 ATCTGTACCTCATCTGCAAAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCC 130428 || || || ||| | | ||| ||| | | ||||| ||| || || || ||| | Sbjct 435655 AT-TGGACTTCA-GAGGAGAATCGTTCAAGCAAGTTCTCGTTAACGATACCGTCAGACGC 435598 Query 130429 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 130485 |||||| || ||||| | || | | ||| | | ||||| || || | || | || Sbjct 435597 AGCAAAGAAGGCCAGAACATGCGAGACGAAGTGACGCTCATTATCATTAAGGCGGTTGTT 435538 Query 130486 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| ||| ||||| || || || | |||||| || ||||| Sbjct 435537 CCAGTCGTGAAGGTCCTTTGACAGGTCCATCTCCTCGGCCGTCCA 435493 >seq769 Length=68272 Score = 104 bits (114), Expect = 3e-17 Identities = 217/319 (68%), Gaps = 7/319 (2%) Strand=Plus/Plus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGC 14212 |||||||||||||| | ||| || || | || | ||||||||||| || ||| Sbjct 2018 AAGCCATCCATCTCCACAAGGAGCTGGTTCAAAGTGTTCTCGCGTTCATCGTTAGCACCG 2077 Query 14213 ATACCACC----CGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268 || ||||| || || ||| ||| |||| |||||| |||||||||| |||||| || Sbjct 2078 ATTCCACCTTTTCG-ACCGCGAGCCTTGCCGATGGCGTCGATTTCATCGACGAAAACAAT 2136 Query 14269 ACAT-GGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACAC 14327 ||| || | | ||| || | | |||||| || || || | | ||| |||| Sbjct 2137 GCATGGGGCGTTCTTCTTGGCCGTC-GCAAAGAGGTCCCGTACACGAGACGAACCAACAC 2195 Query 14328 CCACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCAC 14387 | |||||||| ||||| || | | | ||||| || ||| || ||||| | ||| | Sbjct 2196 CGACAAACATTTCCACGAACTCTGAGCCGGAAACCGAGAAGAATGGTACGTTGGCTTCTC 2255 Query 14388 CCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCAC 14447 | || ||||| |||||| | || || ||||| || || |||| || | || | Sbjct 2256 CTGCAGTGGCTTTGGCGAGCAAAGTTTTTCCCGTACCGGGAGGACCTGAAAGGATTGCGC 2315 Query 14448 CACGTGGGATCCTGGCACC 14466 | || |||||| ||||||| Sbjct 2316 CTCGAGGGATCTTGGCACC 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618411861801640