Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq616 93.3 5e-14 >seq616 Length=116746 Score = 93.3 bits (102), Expect = 5e-14 Identities = 154/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 79684 GCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGG 79743 ||||| | ||| | || ||||||||||||||||| ||||| |||||||| |||| | Sbjct 87038 GCGCAGTTCTTCAAGGTGTCGTAGATGCCCTCGATAGAGTCATCCTTCATGCACACCAAG 87097 Query 79744 AAGC---AGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCG 79800 |||| |||| || ||| | ||| |||||||| ||||| || ||||| | || Sbjct 87098 AAGCACGAGCT---CAGCTGAGCGTTAGGAGTACCGGCATTGAACAGCGTCGGTGAAGCA 87154 Query 79801 TGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCG 79860 || |||||||| | ||| || | ||| ||||| | | || | ||| || Sbjct 87155 TGGGTGAAGAAGCGCTCTGACATAAGGTGGTATGTCTCAATAGCACGGTCTACGTCTGCG 87214 Query 79861 CCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 ||||| || || |||||||| ||||||| | || ||| || Sbjct 87215 CCGTGAATACCAACCGCGACACGCATGAGCATGTGCTGTGG 87255 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| |||||||| || || || |||| ||| | || | Sbjct 87255 CCACAGCACATGCTCATGCGTGTCGCGGTTGGTATTCACGGCGCAGACGTAGACCGTGCT 87196 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||||||||| |||| ||| || |||||||| || || | ||||| || ||| Sbjct 87195 ATTGAGACATACCACCTTATGTCAGAGCGCTTCTTCACCCATGCTTCACCGACGCTGTTC 87136 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCT---GTTTCCTAGTGGCTATGAAGGAT 19279 || |||||||| ||| | ||| || |||| | ||| | ||| ||||||||| Sbjct 87135 AATGCCGGTACTCCTAACGCTCAGCTG---AGCTCGTGCTTCTTGGTGTGCATGAAGGAT 87079 Query 19280 GACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGC 19320 ||| || |||||||||||||| || | ||| | ||||| Sbjct 87078 GACTCTATCGAGGGCATCTACGACACCTTGAAGAACTGCGC 87038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548504100045360