Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1814 140 4e-28 seq260 104 3e-17 seq616 82.4 8e-11 >seq1814 Length=443622 Score = 140 bits (154), Expect = 4e-28 Identities = 366/550 (67%), Gaps = 14/550 (3%) Strand=Plus/Minus Query 74726 CCTCAGGTGAGAGTAAAGC-GTCACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTA 74784 ||| ||||||||| | || | || | |||| || ||| ||| || || | ||| | Sbjct 436035 CCTGAGGTGAGAGAATAGGAGGCAAG-CAAAGTCGGTGTGCATGCCCTCGTCGCGGCTAA 435977 Query 74785 TCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGG 74844 | | || ||||| || | || || ||||| || ||||| ||||||| ||| ||||| | Sbjct 435976 TGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGACCACGTTTCTTCAGCCAGAAGATCG 435917 Query 74845 CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCG 74904 ||| || ||| ||| ||||| || ||||| |||||||||||| || || | | Sbjct 435916 ACGCGAAAGATCCAGAGAAAAAGATACCCTCGACGGCCGCAAAGGCGACGAGACGCTCAG 435857 Query 74905 CGAACGGTGC---ATCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCG 74961 ||| | || ||| | ||||| || | ||||| ||||| || | ||||| Sbjct 435856 AGAAGGACGCGTTCTCGTCCGAAATCCATTTCAGCGCCCAATCAGCCTTCCTCTTGACGC 435797 Query 74962 CAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCT-CTTCGGGATCCTTGACGAGC 75020 ||||| ||| ||||| || | ||||||| | | || |||| || ||||||| | | Sbjct 435796 AAGGGATAGTCTCGATGGCATCGAAGAGGTATTCACGCTGCTTC-GGTTCCTTGATGTAC 435738 Query 75021 TTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCG 75080 |||| || | || ||||| ||||| || || || ||| | | ||| | | Sbjct 435737 GTGTCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAGCCA 435678 Query 75081 TAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAA--ATTCATGTCGATATTCT 75138 ||||| ||||||||||| ||| || || || || || |||| | | |||| Sbjct 435677 TAGAACGACCGCGCCTCGGCACATTGGACTTCAGAGGAGAATCGTTCAAG--CAAGTTCT 435620 Query 75139 CCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCT 75198 | | ||||| ||||| || || || || || ||||| || || ||||| |||| Sbjct 435619 CGTTAACGATACCGTCAGACGCAGCAAAGAAGGCCAGAACATGCGAGACGAAGTGACGCT 435560 Query 75199 CATCGTCAGT---GAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGA 75255 ||| ||| | | | |||| ||| || | |||||| | || || ||||||||| Sbjct 435559 CATTATCATTAAGGCGGTTGTTCCAGTCGTGAAGGTCCTTTGACAGGTCCATCTCCTCGG 435500 Query 75256 CCGTCCAGAA 75265 |||||||||| Sbjct 435499 CCGTCCAGAA 435490 >seq260 Length=90322 Score = 104 bits (114), Expect = 3e-17 Identities = 221/326 (68%), Gaps = 8/326 (2%) Strand=Plus/Plus Query 124712 CTCGTGGTTGAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTT 124771 |||||||||||||| ||| ||| | || |||||||| || |||| ||| |||||||| Sbjct 61166 CTCGTGGTTGAACAAAATACCATTGCATGCAAACATGCCATACGCCTCCCGGTAGTTGAC 61225 Query 124772 CGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGT 124831 || ||||| || | ||||||| | ||||||||||| ||| |||||||| || || Sbjct 61226 AGTGATCCAGTAGCTGTAGAGCTTTGCAACGCCATAGGGAGATCGAGGGTAGAAAGGAGT 61285 Query 124832 GTTTTCATTTTGGGTAGGTTGCTGA---ATCTTCCCAAACATCTCCGAAGTACCCGCCTG 124888 | | || | || ||| || | | ||| || | | || || || |||||| Sbjct 61286 GGTCTCGCTCTG---TGGTGTCTCAACGACCTTTCCGTAGAGTTCAGAGGTTGACGCCTG 61342 Query 124889 ATAGAATTTGAATTTTGAAATAGAATTCGTTTG-ACGAATTGCCTCCAAGATCCGAAGGG 124947 ||||| ||| | | || || || ||| || || || | | || |||| Sbjct 61343 GTAGAA-ACGAACATGCTTCTCGAGACCGCATGTACGGATGGCATCGAGTAAACGGAGGG 61401 Query 124948 TTCCCATGGCGTCCACATTGGCGGTATACTCGGGCTGATCAAAAGACAGTTTCACATGGG 125007 | |||| | |||| |||| | || || |||| | ||| || || | || ||||||| Sbjct 61402 TACCCAGGCCGTCGACATCACCAGTGTATTCGGCCATATCGAACGAGACCTTTACATGGG 61461 Query 125008 ACTGGGCACCTAGGTTGTACACCTCG 125033 |||| ||||| |||||||| || ||| Sbjct 61462 ACTGTGCACCGAGGTTGTAAACTTCG 61487 >seq616 Length=116746 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/194 (71%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||||| ||||| | ||||| ||||| | ||| || || |||| |||||| ||| Sbjct 87242 TCATGCGTGTCGCGGTTGGTATTCACGGCGCAGACGTAGAC-CGTGCTATTGAGACATAC 87184 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 || | ||| | | ||| || || || | || || |||||||| || ||||| Sbjct 87183 CACCTTATGTCAGAGCGCTTCTTCACCCATGCTTCACCGACGCTGTTCAATGCCGGTACT 87124 Query 53312 AATCACCCTCAGATGTCGAGCT---GCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368 | || ||||| || |||| ||||| ||||| |||||||||||||| ||||| Sbjct 87123 CCTAACGCTCAGCTG---AGCTCGTGCTTCTTGGTGTGCATGAAGGATGACTCTATCGAG 87067 Query 53369 GGCATCTACGAGAC 53382 ||||||||||| || Sbjct 87066 GGCATCTACGACAC 87053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547195349436200