Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq454 199 5e-46 seq221 170 2e-37 seq2162 136 5e-27 seq260 98.7 1e-15 seq1947 89.7 6e-13 >seq454 Length=96760 Score = 199 bits (220), Expect = 5e-46 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||||||||| || || ||||| || |||||| | Sbjct 80194 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAGACGATCACGCTTGAAGTCGAGTCATCT 80135 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||||| || |||||||||||||| || ||||||||||||||| Sbjct 80134 GATACGATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAG 80075 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || |||||||| |||||||| || || | |||||| || | || || || Sbjct 80074 CAACGACTCATCTTTGCTGGCAAGCAACTTGAAGACGGTCGTACACTCTCGGATTACAAC 80015 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| ||||||||||| || ||| | |||||||| || ||| Sbjct 80014 ATCCAGAAGGAGTCCACTCTTCACCTCGTCCTTCGTCTTCGAGGAGGA 79967 Score = 170 bits (188), Expect = 2e-37 Identities = 162/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| ||||| |||||||| ||||| | ||||||||||| Sbjct 79967 AATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACCATTACATTGGAGGTTGAGTCGTC 79908 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| ||||||| || ||||| || ||||| || ||||||||||| || Sbjct 79907 GGACACCATTGACAATGTGAAGGCCAAGATTCAAGATAAGGAAGGGATTCCTCCAGATCA 79848 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||| | || |||||||| |||||||| ||||||| ||| || || | || || || Sbjct 79847 ACAGCGCTTGATCTTTGCTGGCAAGCAACTTGAGGATGGTCGGACGCTTTCCGATTACAA 79788 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCT 27611 | |||| |||||| ||| |||||||| Sbjct 79787 TATCCAGAAGGAAAGCACGCTTCATCT 79761 Score = 165 bits (182), Expect = 9e-36 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| ||||| | |||||||| || Sbjct 80473 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTTGAATCGTCC 80414 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| |||| || || |||||||| |||||||| ||||| ||||| ||| Sbjct 80413 GACACGATCGACAATGTGAAAGCGAAGATTCAGGATAAGGAGGGCATTCCACCAGATCAG 80354 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||||||||| || ||||||| ||| || || | ||||| ||| Sbjct 80353 CAGCGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTGTCCGACTACAAT 80294 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | || ||||| || |||||||| || Sbjct 80293 ATTCAGAAGGAGTCTACTCTTCACCT 80268 >seq221 Length=41398 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||||||||| || || |||||||| ||||| | Sbjct 37270 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGTCCTCT 37211 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || ||||||||||||||||| |||||||| |||||| Sbjct 37210 GACACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 37151 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| | ||||| | ||| ||||| | || || || Sbjct 37150 CAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGTCGCACCCTTTCTGATTACAAC 37091 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||||||| || ||| | ||||| || || || Sbjct 37090 ATCCAGAAGGAGAGCACTCTTCACCTTGTCCTTCGTCTCCGTGGCGG 37044 Score = 165 bits (182), Expect = 9e-36 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || ||||| || || |||||||| ||||| Sbjct 37548 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATCACCCTTGAGGTGGAGTCCTCC 37489 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || |||||||||||||||||||||||||| Sbjct 37488 GACACCATCGACAACGTTAAGGCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAA 37429 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || || || ||||| |||||||||| ||||||||| | |||||||| Sbjct 37428 CAACGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACCCTTTCTGACTATAAC 37369 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| ||||||||| || Sbjct 37368 ATCCAGAAGGAGAGCACTCTTCACCT 37343 Score = 159 bits (176), Expect = 4e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||||||||| || ||||||||||| || |||||||| ||||| | Sbjct 37826 ATGCAGATTTTCGTCAAGACGCTCACGGGCAAGACTATCACCCTTGAGGTCGAGTCCTCT 37767 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || ||||||||||| || ||||||||||| Sbjct 37766 GACACCATCGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCAGACCAA 37707 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || || || ||||| |||||||||| ||| || || | |||||||| Sbjct 37706 CAACGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACACTCTCTGACTATAAC 37647 Query 27586 GTCCAAAAGGA 27596 |||| ||||| Sbjct 37646 ATCCAGAAGGA 37636 Score = 159 bits (176), Expect = 4e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||||||||| || || |||||||| ||||| | Sbjct 38111 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 38052 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | |||||||| ||||| ||||||||||| |||||||| ||||| Sbjct 38051 GACACCATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCTCCCGACCAA 37992 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||| |||||||||||||||| || || || | || || || Sbjct 37991 CAGCGTTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTTTCCGATTACAAC 37932 Query 27586 GTCCAAAAGGA 27596 |||| ||||| Sbjct 37931 ATCCAGAAGGA 37921 >seq2162 Length=51060 Score = 136 bits (150), Expect = 5e-27 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || || || || || ||||| ||||||||||| || | ||| | ||| | ||| Sbjct 4857 CTCACGGGTAAAACCATCACTCTCGAGGTTGAGTCCTCAGACACCATCGACAATGTCAAG 4798 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 || || || ||||||||||| || ||||| |||||||||||||| | || || || ||| Sbjct 4797 GCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGT 4738 Query 27547 AAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCT 27605 ||||| || ||||||| || || || ||| ||||| || |||||||||| ||||| || Sbjct 4737 AAGCAGCTTGAGGATGGGCGCACTCTCAGC-GACTACAACATCCAAAAGGAGTCCACCCT 4679 Query 27606 TCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| | || | ||||| || ||||| Sbjct 4678 TCACTTGGTGCTCCGTCTCCGTGGTGG 4652 >seq260 Length=90322 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 24765 GAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAG 24824 ||||| |||||| ||||||||||| || || || ||| || ||||| || ||||| Sbjct 61306 GAGACACCACAGAGCGAGACCACTCCTTTCTACCCTCGATCTCCCTATGGCGTTGCAAAG 61247 Query 24825 GTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAAC 24884 | | | |||||||| || |||||||| ||||| |||| || | ||||||||| Sbjct 61246 CTCTACAGCTACTGGATCACTGTCAACTACCGGGAGGCGTATGGCATGTTTGCATGCAAT 61187 Query 24885 GGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCTGAATTTGTTACACGAAAGATT 24944 || ||| |||||||||| ||| ||||| |||| ||| || || | |||||| Sbjct 61186 GGTATTTTGTTCAACCACGAGAGCCCCCGTCGTGGACGGACATTCGTAACTAGGAAGATT 61127 Query 24945 ACTC 24948 |||| Sbjct 61126 ACTC 61123 >seq1947 Length=41422 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| || ||||| || || |||||||| ||||| | Sbjct 35312 ATGCAGATCTTTGTCAAGACCCTTACGGGGAAGACAATCACCCTTGAGGTGGAGTCTTCT 35371 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | || | ||| | ||||| || ||||| ||||||||||| Sbjct 35372 GACACTATCGACAATGTCAAGGCCAAGATTCAAGACAAGGAGGG 35415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570288877911280