Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq221 118 7e-22 seq454 91.5 9e-14 >seq221 Length=41398 Score = 118 bits (130), Expect = 7e-22 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||||||||||| || |||||||| || ||||| || || | || || || || Sbjct 37346 TGAAGAGTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCCTCGAGCTGC 37405 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||| |||||||| || || | ||||||||||||| |||| || Sbjct 37406 TTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATC-TT 37464 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | |||||| | || ||||| | |||||| || | ||| || || ||||| || Sbjct 37465 CGCCTTAACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCAGT 37524 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || || || || |||||||| Sbjct 37525 CAAGGTCTTGACGAAGATCTGCAT 37548 Score = 114 bits (126), Expect = 8e-21 Identities = 159/218 (73%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 34493 GCAACA--CCAAA-TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCT 34549 |||||| |||| |||||||| |||||||| || ||||| ||||| ||||| || || Sbjct 37895 GCAACATACCAAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGC 37954 Query 34550 CGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCT 34609 | || || ||||| || || || || || |||||||||||||| || || | ||||||| Sbjct 37955 CATCCTCGAGTTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCT 38014 Query 34610 TGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| ||| || | || || | || ||||| | ||| || || | ||| Sbjct 38015 TGTCT-TGAATCTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTG 38073 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || |||||||| |||||||| Sbjct 38074 ATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 38111 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | || | || |||||||||||||| || ||||| ||||| ||| Sbjct 37044 CCGCCACGGAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAA 37103 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || | || || ||||| || || | ||||| |||||||| || Sbjct 37104 AGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 37163 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| || | || ||| || ||| ||||| | |||||| Sbjct 37164 ATACCCTCCTTGTC-CTGAATCTTGGCCTTGACGTTATCAATGGTGTCAGAGGACTCCAC 37222 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || ||||| || || || || || |||||||| Sbjct 37223 CTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 37270 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| | ||| |||||||| || |||||||| || || ||||| || | || || || || Sbjct 37623 ATGCAAAGTACTCTCCTTCTGGATGTTATAGTCAGAGAGTGTGCGACCATCCTCGAGCTG 37682 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || | ||| |||||||| || || | |||||||||||| |||| | Sbjct 37683 CTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATC-T 37741 Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 ||| || || | || ||||| | ||| || || | ||| || || || || | Sbjct 37742 TTGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATAGTCTTGCCCG 37801 Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707 | | ||| || || |||||||||||| Sbjct 37802 TGAGCGTCTTGACGAAAATCTGCATG 37827 >seq454 Length=96760 Score = 91.5 bits (100), Expect = 9e-14 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | |||||| | || | ||| || || |||||| || ||||| || || || Sbjct 80702 GCCGCCACGAAGACGGAGGACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 80761 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||||||||||||||||||||| || || ||||||||||| || || || Sbjct 80762 TAGCGTACGGCCGTCTTCAAGTTGTTTACCGGCGAAGATCAAACGCTGTTGATCAGGAGG 80821 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| |||||| | || | || |||||| |||||| || ||||| ||||| || Sbjct 79968 CCTCCTCGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAG 80027 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || ||||||||||||| || || ||||| || | || || ||||| || || Sbjct 80028 AGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGA 80087 Query 34600 ACTCCCTCCTTGTC 34613 | || |||||||| Sbjct 80088 ATGCCTTCCTTGTC 80101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314718019819427