Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq221 122 8e-23 seq454 116 3e-21 >seq221 Length=41398 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || ||||| ||||| | || Sbjct 37270 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGTCCTCT 37211 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || || || || || || || Sbjct 37210 GACACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 37151 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || ||||| ||| || ||| |||| ||||||||| Sbjct 37150 CAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGTCGCACCCTTTCTGATTACAAC 37091 Query 27168 ATTCAAAAGGAG 27179 || || |||||| Sbjct 37090 ATCCAGAAGGAG 37079 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||||||||| | || || ||||| || || | || Sbjct 38111 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 38052 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||| || || || || ||||| ||| Sbjct 38051 GACACCATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCTCCCGACCAA 37992 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| ||||| ||| | || || | || |||||||||||||| Sbjct 37991 CAGCGTTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTTTCCGATTACAAC 37932 Query 27168 ATTCAAAAGGAG 27179 || || |||||| Sbjct 37931 ATCCAGAAGGAG 37920 >seq454 Length=96760 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || || || || |||||| | ||||| | || || || | Sbjct 80705 CGGCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTCGAGTC 80646 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 ||| ||| |||| || | || || || ||||| || || || || || |||||||| Sbjct 80645 GTCTGACACGATCGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCACCCGA 80586 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 |||||||||| | || | ||| || ||||| | || || || || | |||||||| Sbjct 80585 TCAACAGCGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACGCTGTCCGATTA 80526 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || |||||||| ||| | ||| | || | ||| | || || ||||| Sbjct 80525 CAATATCCAGAAGGAGTCCACCCTTCATCTTGTCCTCCGTCTTCGTGGCGGCAT 80472 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | ||||| | || || || |||| Sbjct 79966 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACCATTACATTGGAGGTTGAGTCGTCG 79907 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || |||||||| || ||||| || || || |||||| Sbjct 79906 GACACCATTGACAATGTGAAGGCCAAGATTCAAGATAAGGAAGGGATTCCTCCAGATCAA 79847 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | || ||||| ||| | || || || ||| ||||||||||||| Sbjct 79846 CAGCGCTTGATCTTTGCTGGCAAGCAACTTGAGGATGGTCGGACGCTTTCCGATTACAAT 79787 Query 27168 ATTCAAAAGGA 27178 || || ||||| Sbjct 79786 ATCCAGAAGGA 79776 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || |||||| || || || || ||||| ||||||||| | || || |||||||| || | Sbjct 80198 CGGCATGCAAATCTTCGTGAAGACTCTCACCGGCAAGACGATCACGCTTGAAGTCGAGTC 80139 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || || |||| || | || || || ||||| ||||| |||||||| || || || Sbjct 80138 ATCTGATACGATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCAGA 80079 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || || || | || | || ||||| ||| | |||||| || || | || ||||| Sbjct 80078 CCAGCAACGACTCATCTTTGCTGGCAAGCAACTTGAAGACGGTCGTACACTCTCGGATTA 80019 Query 27164 CAACATTCAAAAGGAGTCGAC 27184 |||||| || |||||||| || Sbjct 80018 CAACATCCAGAAGGAGTCCAC 79998 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27093 ATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACC 27152 || || || |||||||||||||| || | |||||| |||||| | |||||| | || Sbjct 80824 ATTCCTCCTGATCAACAGCGTTTGATCTTCGCCGGTAAACAACTTGAAGACGGCCGTACG 80765 Query 27153 GTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGT 27212 | ||||| |||||||| || |||||||| ||| | ||| | || | ||| | || || Sbjct 80764 CTATCCGACTACAACATCCAGAAGGAGTCTACCCTTCATCTTGTCCTCCGTCTTCGTGGC 80705 Query 27213 GGCAT 27217 ||||| Sbjct 80704 GGCAT 80700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434901987266880