Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2162 102 6e-17 seq454 96.9 2e-15 seq221 93.3 3e-14 >seq2162 Length=51060 Score = 102 bits (112), Expect = 6e-17 Identities = 131/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 23631 CCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAA 23689 ||||||||| ||||| ||||||||||| ||||| ||| | ||||| | || ||| | || Sbjct 4858 CCTCACGGGTAAAACCATCACTCTCGAGGTTGAGTCCTCAGACACCATCGACAATGTCAA 4799 Query 23690 AACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCG 23749 | || || ||||| ||||| | || ||||| || ||||| || || || || | Sbjct 4798 GGC-CAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGCGCTTGATCTTCGCGG 4740 Query 23750 GCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807 | || || || || || | |||||| | |||| |||||||| ||||| |||||||| Sbjct 4739 GTAAGCAGCTTGAGGATGGGCGCACTCTCAGCGACTACAACATCCAAAAGGAGTCCAC 4682 >seq454 Length=96760 Score = 96.9 bits (106), Expect = 2e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || ||||| || || |||||||| || ||||| || || | Sbjct 80194 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAGACGATCACGCTTGAAGTCGAGTCATCT 80135 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | |||| || ||| ||||| ||||| | || ||||| || Sbjct 80134 GATACGATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAG 80075 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTACA 23788 || || | || ||||| ||||| ||||| ||||||| || |||| | || |||||| Sbjct 80074 CAACGACTCATCTTTGCTGGCAAGCAACTTGAAGACGGTCGTACACTCTCGG--ATTACA 80017 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || || |||||||| Sbjct 80016 ACATCCAGAAGGAGTCCAC 79998 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || ||||| || | || || || || | Sbjct 80701 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTCGAGTCGTCT 80642 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || || || || ||| | || || ||||| Sbjct 80641 GACACGATCGACAATGTGAAGGCGAAGA-TTCAGGATAAGGAGGGTATCCCACCCGATCA 80583 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || || || || ||||| || || || | ||||| | ||||||||| Sbjct 80582 ACAGCGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACGCTGTCCGATTACAA 80523 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 80522 TATCCAGAAGGAGTCCAC 80505 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || || || || || || || || | || ||||| || | Sbjct 79967 AATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACCATTACATTGGAGGTTGAGTCGTC 79908 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| |||| ||| | || | || | || || || ||||| | || ||||||| Sbjct 79907 GGACACCATTGACAATGTGAAGGCCAAGA-TTCAAGATAAGGAAGGGATTCCTCCAGATC 79849 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 ||||||| || || ||||| ||||| ||||| || || | || || | |||||||| Sbjct 79848 AACAGCGCTTGATCTTTGCTGGCAAGCAACTTGAGGATGGTCGGACGCTTTCCGATTACA 79789 Query 23789 ACATACAAAAAGA 23801 | || || || || Sbjct 79788 ATATCCAGAAGGA 79776 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || ||||| || | || ||||| || | Sbjct 80473 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTTGAATCGTCC 80414 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | || ||| || || || || | || |||||||| Sbjct 80413 GACACGATCGACAATGTGAAAGC-GAAGATTCAGGATAAGGAGGGCATTCCACCAGATCA 80355 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || || | ||||| | ||| ||||| Sbjct 80354 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTGTCCGACTACAA 80295 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 80294 TATTCAGAAGGAGTCTAC 80277 >seq221 Length=41398 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||| | || || || || ||||| || || || || ||| | Sbjct 38111 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 38052 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || ||||| || ||| | || || || || Sbjct 38051 GACACCATCGACAATGTCAAGGCTAAGA-TTCAAGACAAGGAGGGTATTCCTCCCGACCA 37993 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||||| || || || ||||| ||||| || || | |||||| | ||||||||| Sbjct 37992 ACAGCGTTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTTTCCGATTACAA 37933 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 37932 CATCCAGAAGGAG 37920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337997163253652