Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2194 161 2e-34 seq454 158 3e-33 seq221 150 4e-31 seq2162 132 1e-25 >seq2194 Length=79231 Score = 161 bits (178), Expect = 2e-34 Identities = 209/286 (73%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 ||| | ||||||||||||| || ||| | ||||| ||||||||| |||||| | | Sbjct 46615 ACGCTTTATTTAATATTTGCTGTATTTGCAGGTATGATAGGTACTGCTTTTTCTGTTCTA 46556 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 || || ||||||||||| || || ||| ||| | || ||| | ||||||| | Sbjct 46555 ATTAGATTAGAATTAGCAGCACCAGGTGTGCAAGTTTTACAAGGTGACCATCAACTTTTC 46496 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || |||||||||||||| || || || || |||||||| || | |||||||| | | | Sbjct 46495 AATGTTATTATTACGGCACACGCTTTCGTAATGATTTTTTTCATGGTTATGCCTGCTTTA 46436 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTA-ATGATTGGTGCTCCTGATATGGCTTT 7679 | || || || || |||| || | ||| || ||| | ||||| || |||||||| || Sbjct 46435 GTGGGTGGATTTGGTAATTATTTATTACCTGTACATG-TAGGTGCCCCCGATATGGCCTT 46377 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 ||| || | || ||||||||||| || ||| |||| ||||| ||| Sbjct 46376 TCCTAGATTAAATAATATAAGTTTCTGGTTATTACCACCTTCATTA 46331 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/103 (81%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 ||||| ||||| ||||| ||||| | ||||||||| | | ||||| || || || | | Sbjct 45933 TCAGGGTGACCGAAAAACCAGAAAAGATGTTGATATAATACTGGATCACCACCACCAGCT 45992 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 |||||| | || ||||||||||| |||||||||||||| |||| Sbjct 45993 GGATCATAGAAACTAGTATTAAAGTTTCTATCAGTTAATAACA 46035 >seq454 Length=96760 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||| || || ||||| || || |||| ||||||||||| || || Sbjct 80480 ACGAAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGACAGCGT 80539 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||| || |||||||||||||| || ||||| ||||| || ||||| Sbjct 80540 GCGACCATCCTCAAGCTGTTTACCAGCGAAGATAAGACGCTGTTGATCGGGTGGGATACC 80599 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||||||| ||||| ||||| || | || || || || Sbjct 80600 CTCCTTATCCTGAATCTTCGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCCAA 80659 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||||||||| | || || | ||| | ||||| Sbjct 80660 TGTAATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 80701 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| ||||| |||||||| || || |||| |||||||| | | || Sbjct 79974 CGAAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGTGTA 80033 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| || ||||| ||||| ||||| |||||||| ||||| || ||||| ||| Sbjct 80034 CGACCGTCTTCAAGTTGCTTGCCAGCAAAGATGAGTCGTTGCTGGTCTGGAGGAATGCCT 80093 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| ||| ||||| || || || | || || || | | Sbjct 80094 TCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATCGTATCAGATGACTCGACTTCAAGC 80153 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | ||| || | ||| | |||||| Sbjct 80154 GTGATCGTCTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 80194 Score = 136 bits (150), Expect = 9e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| ||||| || || || || | |||||| |||| || || | ||||| || | Sbjct 80266 CAAGGTGAAGAGTAGACTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAA 80325 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| |||||||||||||| || || || || || ||||| || ||||| || || | Sbjct 80326 GCTGCTTACCAGCGAAGATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCCTGAA 80385 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| |||||| ||||| ||||| || | ||| || || || || |||||||||| Sbjct 80386 TCTTCGCTTTCACATTGTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGC 80445 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||| | || || | ||| | ||||| Sbjct 80446 CCGTGAGGGTCTTGACGAAGATCTGCAT 80473 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||| || || ||| ||| || |||| ||||||||||| | || | ||||| || | Sbjct 79759 CAAGATGAAGCGTGCTTTCCTTCTGGATATTGTAATCGGAAAGCGTCCGACCATCCTCAA 79818 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 | ||||| ||||| ||||| | || ||||| || || ||||| |||||||| ||||| | Sbjct 79819 GTTGCTTGCCAGCAAAGATCAAGCGCTGTTGATCTGGAGGAATCCCTTCCTTATCTTGAA 79878 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||||||| || |||||||| || | || || || || || || ||||||| Sbjct 79879 TCTTGGCCTTCACATTGTCAATGGTGTCCGACGACTCAACCTCCAATGTAATGGTCTTGC 79938 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCATT 225714 | || | ||| || | ||| | |||||| Sbjct 79939 CAGTAAGAGTCTTCACGAAGATCTGCATT 79967 >seq221 Length=41398 Score = 150 bits (166), Expect = 4e-31 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||||||||| || || |||| |||||||||| | ||| | ||||| || | Sbjct 37904 CAAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGA 37963 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 | ||||| ||||||||||| | || ||||||||||| |||||||| ||||||||||| | Sbjct 37964 GTTGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGTCTTGAA 38023 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| ||| ||||||||||| |||| || || || | ||||| ||||||| Sbjct 38024 TCTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGC 38083 Query 225686 CCGTCAAAGTTTT 225698 | ||||| || || Sbjct 38084 CGGTCAAGGTCTT 38096 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 ||||| |||||| || || |||| || || || | | || | ||||| || ||| Sbjct 37343 AGGTGAAGAGTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCCTCGAGC 37402 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| || |||||||| || ||||||||||| || ||||| || ||||||||||||||| Sbjct 37403 TGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGTCTTGGATC 37462 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||| || ||||||||||| |||| ||||| || | ||||| ||||| || Sbjct 37463 TTCGCCTTAACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTACCA 37522 Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || | ||| | ||||| Sbjct 37523 GTCAAGGTCTTGACGAAGATCTGCAT 37548 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| |||||| || || |||| |||||||| | | || | || || Sbjct 37059 AGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCGTCC 37118 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || |||||||| || || || ||||| || |||||||| |||||||| Sbjct 37119 TCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 37178 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || || |||||||| |||| ||||| || | ||||| ||| Sbjct 37179 TGAATCTTGGCCTTGACGTTATCAATGGTGTCAGAGGACTCCACCTCAAGTGTGATGGTC 37238 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 37239 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 37270 Score = 127 bits (140), Expect = 5e-24 Identities = 123/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| || |||||||| || ||||||||||| || || || || ||| Sbjct 37669 CCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGGATGCCCTCC 37728 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||||||||||||| ||| ||| ||||||||||| |||| || || || | ||| Sbjct 37729 TTGTCTTGGATCTTTGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTG 37788 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||| | || || | ||| | ||||| Sbjct 37789 ATAGTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCAT 37826 >seq2162 Length=51060 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || ||||| || ||||||| ||||| ||| | ||| | |||||| Sbjct 4667 AGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGCCCATCC 4726 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || || ||||| || ||||| ||||||||||| Sbjct 4727 TCAAGCTGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 4786 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||||||||||| || || || | ||||| || Sbjct 4787 TGGATCTTGGCCTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCGAGAGTGATGGTT 4846 Query 225682 TTGCCCGT 225689 || ||||| Sbjct 4847 TTACCCGT 4854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192485071775186