Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1814 163 2e-35 >seq1814 Length=443622 Score = 163 bits (180), Expect = 2e-35 Identities = 372/555 (67%), Gaps = 15/555 (3%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||||||||| || |||| ||||| || | || || || ||||| || || ||||| Sbjct 433703 ACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGTTAA 433762 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 || ||||| | || | ||| || ||||||||||| | ||||| ||||||| ||||| Sbjct 433763 ACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCAGAGAAGAA 433822 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC--TTTGTCT 4724 ||||||||| || || || ||||| || || || | ||||| || | | ||| Sbjct 433823 TATGCCTTCGACTGCCGCGAACGCCACCAACCGCTCGCTAAACGA--TGACCTCTCGTCC 433880 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 |||||| | |||||||| ||||| || || | | |||||| |||| ||||| Sbjct 433881 GAAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATAGCA 433940 Query 4785 TTAAATAATTTACT----TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 |||| || |||| | | | | ||||| || || ||||| || |||| Sbjct 433941 GTAAACAA-GTACTCCCGCTGGTGA---GAGTCTTTGATGTAGGTGTCAATCAGTAACGA 433996 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 ||| |||| || ||||| || || || | || || |||||||| |||| |||||| Sbjct 433997 GTACGTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTC 434056 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 | || || || || || | || | ||| || | |||||| ||||| |||||||| Sbjct 434057 GGCCACCTGGACCTCATTGGAGAACCGTTCGACGAGGTTTTCATTTACAATACCGTCTGA 434116 Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT--- 5017 ||| || ||||| || | || || || || |||| ||||| || || ||||| Sbjct 434117 GGCGGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGTTTAGTTTGTC 434176 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077 | ||| | | | || | ||| || | ||| || | ||||| || || || || Sbjct 434177 GTGCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCTC 434236 Query 5078 CGCTTTTTTGTACAT 5092 || ||||||||||| Sbjct 434237 GGCCTTTTTGTACAT 434251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427033887110327