Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq850 84.2 2e-11 >seq850 Length=41038 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27454 AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCAT-GTCCGTGTACTCTGCTCCGAA 27512 |||||||| || || ||||| ||||||| ||| || | ||| | ||| || || Sbjct 12969 AGCTGATCTACACCTTCCCCCGTGTAGTCTTGG-TCACAGTTCTCGTATTTTGCCCCAAA 13027 Query 27513 ATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 27572 ||||||||||| || ||||| || || |||| || ||||| || || | || || Sbjct 13028 GTGCCTCCATTGAAATCCGTAGACTGGACCCAAATCACCCTCGCGCCGATGTCCCAATCC 13087 Query 27573 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 27632 | ||| |||||||| | | || || ||| | |||||||||||||| || || | || Sbjct 13088 ACGCTTCTCCAAAAACTGCTTCGACCCATTGCCATCCCAGATCTTTACTCCTTTTTGAGA 13147 Query 27633 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680 ||| |||||| ||| | || || ||||| || || ||||| Sbjct 13148 TAGCAGCGTGGAGTCTGTCGCTCCGTGCACAAACCAAAGGAGTTCCTC 13195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369493604328989