Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1814 125 1e-23 >seq1814 Length=443622 Score = 125 bits (138), Expect = 1e-23 Identities = 290/430 (67%), Gaps = 13/430 (3%) Strand=Plus/Plus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 |||||||| | ||| || | ||||| || || || | ||| ||||| || || || || Sbjct 433725 CCTTCATCACGACTGATGAGCTCGTTGGAGAAGGTTAAACCAGGCATGAGCCCGCGCTTC 433784 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 |||||||||||||||| ||| ||| | ||||| |||||||||||||| || ||||| || Sbjct 433785 TTGAGCCAAAATATTGACGCAAAACACCCAGAGAAGAATATGCCTTCGACTGCCGCGAAC 433844 Query 48282 GCGGTAAGTCTCTCTCCGTAAC--TGGC--TTCGTTGTGTATCCACCGTTGTGCCCAATC 48337 || | | ||| | ||| || | |||| |||||||| ||||||| || Sbjct 433845 GCCACCAACCGCTC-GCTAAACGATGACCTCTCGTCCGAAATCCACCGCAGTGCCCAGTC 433903 Query 48338 AGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATT 48397 || ||||| || | || || || || |||||| |||| |||| | | Sbjct 433904 TGCTTTCTTTTTGATGGCCGGAATCGTGTCGATAGCAGTAAA---CAAGTACTCCCGCTG 433960 Query 48398 GCTA---TCTTTAACGTAAGTATCTATTAAAAGACTA-TACATTTCGGAGTGAATATTTT 48453 | | ||||| | ||| || || || | | || | ||| |||||||||| || || | Sbjct 433961 GTGAGAGTCTTTGATGTAGGTGTCAATCAGTA-ACGAGTACGTTTCGGAGTGTATGTTCT 434019 Query 48454 CAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAA 48513 | || | || || ||||||||||||| ||||| | | ||| ||||| | | | Sbjct 434020 CCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTCGGCCACCTGGACCTCATTGGAGA 434079 Query 48514 ATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACAT 48573 | ||||| | | || |||||||| || || || || || ||||| |||| ||| | Sbjct 434080 ACCGTTCGACGAGGTTTTCATTTACAATACCGTCTGAGGCGGCGAAAAAGGCTAGTACGT 434139 Query 48574 GTTTAATAAA 48583 || ||| || Sbjct 434140 GTGAAATGAA 434149 Score = 120 bits (132), Expect = 4e-22 Identities = 155/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 48174 CTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAAT 48233 ||||| | ||||| || || |||||||||||||| || |||||||| || ||||| || Sbjct 435980 CTAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGACCACGTTTCTTCAGCCAGAAG 435921 Query 48234 ATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTC 48293 || | ||||||||||||||| || || || || || ||||||||||| ||| || | | Sbjct 435920 ATCGACGCGAAAGATCCAGAGAAAAAGATACCCTCGACGGCCGCAAAGGCGACGAGACGC 435861 Query 48294 TCTCCGTA--ACTGGCT-TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTT 48350 || | | || | | |||| ||||| | ||||||||||||||| |||| Sbjct 435860 TCAGAGAAGGACGCGTTCTCGTCCGAAATCCATTTCAGCGCCCAATCAGCCTTCCTCTTG 435801 Query 48351 ACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382 || ||||| || || || || |||| ||||| Sbjct 435800 ACGCAAGGGATAGTCTCGATGGCATCGAAGAG 435769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694642584936160