Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1814 116 5e-21 >seq1814 Length=443622 Score = 116 bits (128), Expect = 5e-21 Identities = 370/562 (66%), Gaps = 14/562 (2%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| ||||| || || | ||||||||| | ||| || | ||||| || || || | Sbjct 433703 ACACGCAAAGTCGGTGTGCATGCCTTCATCACGACTGATGAGCTCGTTGGAGAAGGTTAA 433762 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 |||||||| || || ||||| |||||||||||||| | ||| ||| | ||||| ||||| Sbjct 433763 ACCAGGCATGAGCCCGCGCTTCTTGAGCCAAAATATTGACGCAAAACACCCAGAGAAGAA 433822 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAAC--TGGC--ATCATTAT 46804 ||||||||| || |||||||| || || | | ||| | ||| || | || | Sbjct 433823 TATGCCTTCGACTGCCGCGAACGCCACCAACCGCTC-GCTAAACGATGACCTCTCGTCCG 433881 Query 46805 GAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCAT 46864 |||||||| | ||||| || || || || || | || || || || |||||| Sbjct 433882 AAATCCACCGCAGTGCCCAGTCTGCTTTCTTTTTGATGGCCGGAATCGTGTCGATAGCAG 433941 Query 46865 TAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTA-TAC 46923 |||| | | | | | | ||||| | || || || || | | || | ||| Sbjct 433942 TAAACAAGTACTCCCGCTGGTGAGAGTCTTTGATGTAGGTGTCAATCAGTA-ACGAGTAC 434000 Query 46924 ATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 46983 |||| || || ||||| || || | || || ||||||||||||| ||||| | Sbjct 434001 GTTTCGGAGTGTATGTTCTCCATCATGACTTGGAAGCCGTAAAAACATCGAGCTTCGGCC 434060 Query 46984 ATCTGTACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTCACTATTCCATCACTAGC 47042 | ||| ||||| | | || ||||| ||| | || ||||| || || || || || Sbjct 434061 ACCTGGACCTCATTGGAGAACCGTTC-GACGAGGTTTTCATTTACAATACCGTCTGAGGC 434119 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCG-GTAGTCAGTTTAT 47098 || ||||| || | ||| ||| ||| || | || ||||| |||| | | | Sbjct 434120 GGCGAAAAAGGCTAGTACGTGTGAAATGAAGTGGCGTTCGCCATCGTTTAGTTTG-TCGT 434178 Query 47099 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTG 47158 ||| || || || | || || | ||| || || |||||||| || ||||| | Sbjct 434179 GCCAATCTGAGAGGTCGTGGCTTAGGTCCATTTCCTCCGCCGTCCAGAAAGAAGCCTCGG 434238 Query 47159 CTTTTTTATACATATTCCATAT 47180 | ||||| ||||| | ||| || Sbjct 434239 CCTTTTTGTACATTTGCCAGAT 434260 Score = 102 bits (112), Expect = 1e-16 Identities = 159/225 (71%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 46650 GCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTT 46709 ||| || || | ||||| | ||||| || || ||||| || ||||| || ||||| || Sbjct 435993 GCCCTCGTCGCGGCTAATGAGCTCGTTCGAGAAGGTGAGACCGGGCATCAGACCACGTTT 435934 Query 46710 TTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAA 46769 || ||||| || || | ||||||||||||||| || || || || || || ||||| || Sbjct 435933 CTTCAGCCAGAAGATCGACGCGAAAGATCCAGAGAAAAAGATACCCTCGACGGCCGCAAA 435874 Query 46770 TGCGACAAGTCTCTCTCCGTA--AC-TGGCATCATTATGAATCCACCTTTGAGCCCAATC 46826 ||||| || | ||| | | || | || | |||||| | | |||||||| Sbjct 435873 GGCGACGAGACGCTCAGAGAAGGACGCGTTCTCGTCCGAAATCCATTTCAGCGCCCAATC 435814 Query 46827 AGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 |||||| |||| || ||||| || || || || |||| ||||| Sbjct 435813 AGCCTTCCTCTTGACGCAAGGGATAGTCTCGATGGCATCGAAGAG 435769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712907495638080