Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq221 156 1e-32 seq454 138 3e-27 seq2162 136 1e-26 >seq221 Length=41398 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || |||||||| ||||| || ||| ||| Sbjct 37823 CAGATTTTCGTCAAGACGCTCACGGGCAAGACTATCACCCTTGAGGTCGAGTCCTCTGAC 37764 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||| || ||||| || || |||||||| ||||| ||| Sbjct 37763 ACCATCGACAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCAGACCAACAA 37704 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| |||||||| ||||| | || || | || |||||| || Sbjct 37703 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACACTCTCTGACTATAACATC 37644 Query 178104 CAAAAAGAATCAACACTGCATCT-----TGTTTTGA 178134 || || || || ||||||| |||||||| Sbjct 37643 CAGAAGGAGAGTACTTTGCATCTCGGTATGTTTTGA 37608 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || |||||||| |||||||| ||| ||| Sbjct 37545 CAGATCTTCGTCAAGACCTTGACTGGTAAGACCATCACCCTTGAGGTGGAGTCCTCCGAC 37486 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || ||||| || ||||| ||||| ||||| ||| Sbjct 37485 ACCATCGACAACGTTAAGGCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAACAA 37426 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| |||||||| ||||| | || ||| | || |||||| || Sbjct 37425 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACCCTTTCTGACTATAACATC 37366 Query 178104 CAAAAAGA 178111 || || || Sbjct 37365 CAGAAGGA 37358 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || ||||| || |||||||| ||| ||| Sbjct 37267 CAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACACTTGAGGTGGAGTCCTCTGAC 37208 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || || |||||||||||||| Sbjct 37207 ACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 37148 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||| | || || || | || ||| | ||||| ||| || Sbjct 37147 CGCCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGTCGCACCCTTTCTGATTACAACATC 37088 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 37087 CAGAAGGAGAGCACTCTTCACCTTGT 37062 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | || || || || |||||||| ||||| || ||| ||| Sbjct 38108 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGAC 38049 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||| ||||| || || || ||||| ||||| || Sbjct 38048 ACCATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGTATTCCTCCCGACCAACAG 37989 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || ||||| ||||| | |||||| ||||||| ||| || Sbjct 37988 CGTTTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTTTCCGATTACAACATC 37929 Query 178104 CAAAAAGA 178111 || || || Sbjct 37928 CAGAAGGA 37921 >seq454 Length=96760 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| |||||||| || || |||||||| || || || || || || Sbjct 80191 CAAATCTTCGTGAAGACTCTCACCGGCAAGACGATCACGCTTGAAGTCGAGTCATCTGAT 80132 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||||||||| ||||| || ||||| ||||||||| Sbjct 80131 ACGATCGACAATGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAGCAA 80072 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| || || || || || ||||| || | || || | ||||| ||| || Sbjct 80071 CGACTCATCTTTGCTGGCAAGCAACTTGAAGACGGTCGTACACTCTCGGATTACAACATC 80012 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 80011 CAGAAGGAGTCCACTCTTCACCTCGT 79986 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || ||||| || | ||||| || || ||| Sbjct 80698 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTCGAGTCGTCTGAC 80639 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||||| || || || ||||| || || || || Sbjct 80638 ACGATCGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCACCCGATCAACAG 80579 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || |||||||| || ||||| | || || ||||||| || || Sbjct 80578 CGTCTTATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACGCTGTCCGATTACAATATC 80519 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || |||||||| Sbjct 80518 CAGAAGGAGTCCACCCTTCATCTTGT 80493 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || ||||| || | ||||| ||| || ||| Sbjct 80470 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATTACATTGGAGGTTGAATCGTCCGAC 80411 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| ||||||||||| || || || || || || || ||||| Sbjct 80410 ACGATCGACAATGTGAAAGCGAAGATTCAGGATAAGGAGGGCATTCCACCAGATCAGCAG 80351 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || ||||| | || || |||| || || | Sbjct 80350 CGTCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTGTCCGACTACAATATT 80291 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 80290 CAGAAGGAGTCTACTCTTCACCTTG 80266 >seq2162 Length=51060 Score = 136 bits (150), Expect = 1e-26 Identities = 143/187 (76%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || ||||| ||||| |||||||| || ||||||||||||||| || ||||| Sbjct 4857 CTCACGGGTAAAACCATCACTCTCGAGGTTGAGTCCTCAGACACCATCGACAATGTCAAG 4798 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| ||||| || || || |||||||| || | |||||||| || Sbjct 4797 GCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGT 4738 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || ||||| || ||||| | ||||| ||| || ||| ||||||| || || || || Sbjct 4737 AAGCAGCTTGAGGATGGGCGCACTCTCAGCGACTACAACATCCAAAAGGAGTCCACCCTT 4678 Query 178122 CATCTTG 178128 || |||| Sbjct 4677 CA-CTTG 4672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203684638548686